Factsheet for Bra013742.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 8
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47613	Canola	mitochondrion	99.58	99.58
Solyc06g075470.1.1	Tomato	cytosol	31.22	93.67
AT4G23900.1	Thale cress	mitochondrion	90.3	90.3
Bra033163.1-P	Field mustard	plastid	85.23	85.96
TraesCS1D01G452300.1	Wheat	cytosol	58.65	85.8
Bra035260.1-P	Field mustard	mitochondrion	83.12	83.47
PGSC0003DMT400014828	Potato	mitochondrion	76.79	78.45
Solyc08g008340.2.1	Tomato	plastid	76.79	77.78
VIT_02s0025g01500.t01	Wine grape	plastid	75.95	76.6
Solyc08g082430.2.1	Tomato	plastid	76.79	76.47
PGSC0003DMT400031997	Potato	extracellular	76.79	76.47
KRH41307	Soybean	mitochondrion	75.53	75.85
KRH60038	Soybean	mitochondrion	74.68	75.32
GSMUA_Achr1P11560_001	Banana	mitochondrion	68.78	68.78
GSMUA_Achr4P01100_001	Banana	mitochondrion	68.78	68.49
Os05t0595400-01	Rice	plastid	68.35	67.78
Zm00001d039221_P001	Maize	mitochondrion	67.51	67.51
Zm00001d009774_P001	Maize	mitochondrion	67.09	66.81
KXG22725	Sorghum	mitochondrion	67.93	66.26
TraesCS1A01G444300.1	Wheat	mitochondrion, plastid	66.24	65.15
TraesCS1B01G478800.1	Wheat	plastid	67.09	64.11
HORVU1Hr1G095400.2	Barley	plastid	66.67	63.71
Zm00001d004713_P001	Maize	endoplasmic reticulum	49.37	61.26
Bra030844.1-P	Field mustard	cytosol	35.87	57.43
Bra027579.1-P	Field mustard	cytosol	35.44	56.76
Bra013108.1-P	Field mustard	cytosol	16.88	47.62
AT4G23895.3	Thale cress	cytosol	89.45	45.4
Zm00001d024444_P001	Maize	plastid	53.16	43.6
Bra038621.1-P	Field mustard	plastid	38.82	39.66

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	EnsemblPlantsGene:Bra013742
EnsemblPlants:Bra013742.1	EnsemblPlants:Bra013742.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550	GO:GO:0006139
GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:IPR036850	UniProt:M4DB82
HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	PFAM:PF00334	PRINTS:PR01243
PANTHER:PTHR11349	PANTHER:PTHR11349:SF91	SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI0002545EDD	SEG:seg

Description

AT4G23900 (E=2e-114) | nucleoside diphosphate kinase 4 (NDK4)

Coordinates

chrA01:+:7526921..7528327

Molecular Weight (calculated)

25968.1 Da

IEP (calculated)

10.246

GRAVY (calculated)

-0.228

Length

237 amino acids

Sequence
(BLAST)

001: MSSQICRSAT RAARSLLSSS KNTRFFSEGR AIGAATVVYA SGKVPQNASN FRQSRSGFAS KSWMTGLLAL PTAAFMLQDQ EVHAAEMERT FIAIKPDGVQ
101: RGLISEIITR FERKGFKLVG LKIMVPSKGF AQQHYHGAKE RPFFNGLCNF LSSGPVVAMV WEGEGVIRYG RKLIGATDPQ KSEPGTIRGD LAVVVGRNII
201: HGSDGAETAK DEISLWFKPE ELVSYTSNAE KWIYGQN

Best Arabidopsis Sequence Match ( AT4G23900.1 )
(BLAST)

001: MSSQICRSAS RAARSLLSSA KNARFFSEGR AIGAASVVHA TGKVPQYASN FGKSGSGFVS NSWITGLLAL PAAAFMLQDQ EALAAEMERT FIAIKPDGVQ
101: RGLISEIITR FERKGYKLVG IKVMVPSKGF AQKHYHDLKE RPFFNGLCNF LSSGPVVAMV WEGEGVIRYG RKLIGATDPQ KSEPGTIRGD LAVVVGRNII
201: HGSDGPETAK DEISLWFKPE ELVSYTSNAE KWIYGQN

Arabidopsis Description

NDK4Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LAH8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.