Factsheet for Bra013108.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93161	Canola	cytosol	67.86	90.48
Bra027579.1-P	Field mustard	cytosol	85.71	48.65
Bra030844.1-P	Field mustard	cytosol	83.33	47.3
KRH66485	Soybean	endoplasmic reticulum	78.57	44.3
GSMUA_Achr11P...	Banana	cytosol	73.81	43.66
KRH48835	Soybean	endoplasmic reticulum, nucleus	77.38	43.62
VIT_15s0021g01330.t01	Wine grape	cytosol, extracellular	76.19	43.24
PGSC0003DMT400080042	Potato	cytosol	76.19	43.24
Solyc01g089970.2.1	Tomato	extracellular, plastid	75.0	42.57
AT4G09320.1	Thale cress	cytosol, mitochondrion, nucleus	75.0	42.28
GSMUA_Achr8P15010_001	Banana	cytosol	72.62	41.22
GSMUA_Achr5P18300_001	Banana	cytosol, unclear	71.43	40.54
EER91919	Sorghum	cytosol	71.43	40.27
Zm00001d029968_P001	Maize	plastid	70.24	39.6
Os10t0563700-01	Rice	extracellular	69.05	38.41
TraesCS1B01G230300.1	Wheat	cytosol, plastid	67.86	38.0
TraesCS1A01G217200.1	Wheat	golgi	67.86	38.0
TraesCS1D01G219000.1	Wheat	plastid	67.86	37.75
HORVU1Hr1G055440.1	Barley	cytosol, plasma membrane	66.67	37.33
EER99399	Sorghum	cytosol	65.48	36.67
Os07t0492000-01	Rice	extracellular	64.29	36.24
Zm00001d021526_P001	Maize	cytosol, extracellular	65.48	35.95
KXG23408	Sorghum	plastid	32.14	34.18
Solyc09g055420.1.1	Tomato	cytosol, unclear	45.24	32.48
TraesCS4A01G213400.2	Wheat	unclear	65.48	28.5
TraesCS4B01G102400.2	Wheat	cytosol	64.29	27.98
TraesCS4D01G099200.2	Wheat	cytosol	63.1	27.46
Bra038621.1-P	Field mustard	plastid	57.14	20.69
Bra033163.1-P	Field mustard	plastid	50.0	17.87
Bra035260.1-P	Field mustard	mitochondrion	48.81	17.37
Bra013742.1-P	Field mustard	mitochondrion	47.62	16.88

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:50.2.7	EnsemblPlantsGene:Bra013108
EnsemblPlants:Bra013108.1	EnsemblPlants:Bra013108.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550	GO:GO:0006139
GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:IPR036850	UniProt:M4D9E8
InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	PFAM:PF00334	PANTHER:PTHR11349	PANTHER:PTHR11349:SF66	SMART:SM00562
SUPFAM:SSF54919	UniParc:UPI0002540A61	:	:	:	:

Description

AT4G09320 (E=6e-029) NDPK1 | NDPK1; ATP binding / nucleoside diphosphate kinase

Coordinates

chrA03:+:20428947..20429452

Molecular Weight (calculated)

9532.7 Da

IEP (calculated)

10.005

GRAVY (calculated)

-0.130

Length

84 amino acids

Sequence
(BLAST)

1: MIKPVGVQRS LVGEIIGRFE NKGFTLKGLK LIAVDRPFAE KHYQDLSAKP YSLVDYIISG PVVAMIWEGK NVVLTYGKKD HWRD

Best Arabidopsis Sequence Match ( AT4G09320.1 )
(BLAST)

001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET

Arabidopsis Description

NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.