Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 3
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr5P18300_001 | Banana | cytosol, unclear | 93.66 | 89.86 |
GSMUA_Achr8P15010_001 | Banana | cytosol | 88.03 | 84.46 |
PGSC0003DMT400080042 | Potato | cytosol | 85.92 | 82.43 |
Solyc01g089970.2.1 | Tomato | extracellular, plastid | 85.21 | 81.76 |
EER91919 | Sorghum | cytosol | 85.21 | 81.21 |
Zm00001d029968_P001 | Maize | plastid | 84.51 | 80.54 |
CDX93161 | Canola | cytosol | 35.21 | 79.37 |
TraesCS1B01G230300.1 | Wheat | cytosol, plastid | 83.8 | 79.33 |
VIT_15s0021g01330.t01 | Wine grape | cytosol, extracellular | 82.39 | 79.05 |
TraesCS1D01G219000.1 | Wheat | plastid | 83.8 | 78.81 |
TraesCS1A01G217200.1 | Wheat | golgi | 83.1 | 78.67 |
KRH66485 | Soybean | endoplasmic reticulum | 82.39 | 78.52 |
KRH48835 | Soybean | endoplasmic reticulum, nucleus | 82.39 | 78.52 |
HORVU1Hr1G055440.1 | Barley | cytosol, plasma membrane | 82.39 | 78.0 |
Bra027579.1-P | Field mustard | cytosol | 80.28 | 77.03 |
CDY71669 | Canola | cytosol, plasma membrane | 80.28 | 77.03 |
CDY13081 | Canola | cytosol | 80.28 | 77.03 |
AT4G09320.1 | Thale cress | cytosol, mitochondrion, nucleus | 80.28 | 76.51 |
Bra030844.1-P | Field mustard | cytosol | 78.87 | 75.68 |
CDY42375 | Canola | cytosol | 78.87 | 75.68 |
Os10t0563700-01 | Rice | extracellular | 80.28 | 75.5 |
EER99399 | Sorghum | cytosol | 79.58 | 75.33 |
CDY10545 | Canola | cytosol | 78.17 | 75.0 |
Os07t0492000-01 | Rice | extracellular | 77.46 | 73.83 |
Bra013108.1-P | Field mustard | cytosol | 43.66 | 73.81 |
CDY61716 | Canola | cytosol | 72.54 | 73.57 |
Zm00001d021526_P001 | Maize | cytosol, extracellular | 78.87 | 73.2 |
Solyc09g055420.1.1 | Tomato | cytosol, unclear | 57.75 | 70.09 |
TraesCS4B01G102400.2 | Wheat | cytosol | 76.06 | 55.96 |
TraesCS4A01G213400.2 | Wheat | unclear | 75.35 | 55.44 |
TraesCS4D01G099200.2 | Wheat | cytosol | 75.35 | 55.44 |
VIT_19s0085g00080.t01 | Wine grape | cytosol, mitochondrion | 37.32 | 50.48 |
KXG23408 | Sorghum | plastid | 27.46 | 49.37 |
GSMUA_AchrUn_... | Banana | plastid | 61.97 | 37.61 |
GSMUA_Achr1P11560_001 | Banana | mitochondrion | 58.45 | 35.02 |
GSMUA_Achr4P01100_001 | Banana | mitochondrion | 58.45 | 34.87 |
GSMUA_Achr3P05930_001 | Banana | endoplasmic reticulum | 32.39 | 26.59 |
Protein Annotations
KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:6.3.2.4 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004550 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 |
GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr11G23090_001 |
EnsemblPlants:GSMUA_Achr11P23090_001 | EnsemblPlants:GSMUA_Achr11T23090_001 | InterPro:IPR036850 | UniProt:M0RUN9 | HAMAP:MF_00451 | InterPro:NDK-like_dom |
InterPro:NDK-like_dom_sf | InterPro:Nucleoside_diP_kinase | InterPro:Nucleoside_diP_kinase_AS | PFAM:PF00334 | PRINTS:PR01243 | ScanProsite:PS00469 |
PANTHER:PTHR11349 | PANTHER:PTHR11349:SF66 | SMART:SM00562 | SUPFAM:SSF54919 | UniParc:UPI000295D39C | : |
Description
Nucleoside diphosphate kinase B [Source:GMGC_GENE;Acc:GSMUA_Achr11G23090_001]
Coordinates
chr11:-:23131911..23133729
Molecular Weight (calculated)
15584.9 Da
IEP (calculated)
7.769
GRAVY (calculated)
-0.006
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKPDGVQRG LVGEIIGRFE KKGFYLKGLK MVSVERSFAE KHYADLSAKP FFAGLVEYII SGPVVAMVWE GKSVVVTGRK IIGATNPADS APGTIRGDLA
101: IEIGRNVIHG SDSIEGARKE IALWFPEGIA EWQNSLHPWI YE
101: IEIGRNVIHG SDSIEGARKE IALWFPEGIA EWQNSLHPWI YE
001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
Arabidopsis Description
NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.