CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 5
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027579.1-P	Field mustard	cytosol	100.0	100.0
CDY71669	Canola	cytosol, plasma membrane	99.32	99.32
CDY42375	Canola	cytosol	95.95	95.95
CDY10545	Canola	cytosol	95.27	95.27
CDY61716	Canola	cytosol	88.51	93.57
CDX93161	Canola	cytosol	39.19	92.06
AT4G09320.1	Thale cress	cytosol, mitochondrion, nucleus	89.19	88.59
KRH48835	Soybean	endoplasmic reticulum, nucleus	89.19	88.59
KRH66485	Soybean	endoplasmic reticulum	87.84	87.25
Solyc01g089970.2.1	Tomato	extracellular, plastid	84.46	84.46
PGSC0003DMT400080042	Potato	cytosol	84.46	84.46
VIT_15s0021g01330.t01	Wine grape	cytosol, extracellular	82.43	82.43
Zm00001d029968_P001	Maize	plastid	81.76	81.21
EER91919	Sorghum	cytosol	81.76	81.21
GSMUA_Achr5P18300_001	Banana	cytosol, unclear	81.08	81.08
GSMUA_Achr8P15010_001	Banana	cytosol	81.08	81.08
GSMUA_Achr11P...	Banana	cytosol	77.03	80.28
TraesCS1A01G217200.1	Wheat	golgi	78.38	77.33
TraesCS1B01G230300.1	Wheat	cytosol, plastid	78.38	77.33
TraesCS1D01G219000.1	Wheat	plastid	78.38	76.82
HORVU1Hr1G055440.1	Barley	cytosol, plasma membrane	77.03	76.0
Os10t0563700-01	Rice	extracellular	75.0	73.51
EER99399	Sorghum	cytosol	72.97	72.0
Zm00001d021526_P001	Maize	cytosol, extracellular	73.65	71.24
Solyc09g055420.1.1	Tomato	cytosol, unclear	55.41	70.09
Os07t0492000-01	Rice	extracellular	70.27	69.8
TraesCS4A01G213400.2	Wheat	unclear	72.3	55.44
TraesCS4B01G102400.2	Wheat	cytosol	71.62	54.92
TraesCS4D01G099200.2	Wheat	cytosol	70.95	54.4
KXG23408	Sorghum	plastid	27.03	50.63
CDX84395	Canola	plastid	59.46	37.93
CDY41513	Canola	plastid	59.46	37.93
CDY48138	Canola	plastid	58.78	37.83
CDX94238	Canola	plastid	57.43	36.17
CDY25267	Canola	plastid	57.43	36.17
CDX86826	Canola	mitochondrion	56.76	35.59
CDY03508	Canola	mitochondrion, plastid	56.76	35.44
CDY47613	Canola	mitochondrion	56.76	35.44
CDY66964	Canola	endoplasmic reticulum	34.46	28.98
CDX96770	Canola	endoplasmic reticulum	34.46	28.81
CDY40857	Canola	endoplasmic reticulum, golgi	29.05	12.84

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:A0A078FIU2
UniProt:A0A078FIU2	EnsemblPlants:CDY13081	ProteinID:CDY13081	ProteinID:CDY13081.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006165
GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00070915001	InterPro:IPR036850
HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334
PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF66	MetaCyc:PWY-6545	MetaCyc:PWY-7176
MetaCyc:PWY-7184	MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210
MetaCyc:PWY-7220	MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227
SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI000009F048	:	:	:

Description

BnaA09g17360DNucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078FIU2]

Coordinates

chrLK032031:-:417479..418453

Molecular Weight (calculated)

16396.7 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.089

Length

148 amino acids

Sequence
(BLAST)

001: MEQTFIMIKP DGVQRGLVGE IICRFEKKGF TLKGLKLITV DRPFAEKHYQ DLSAKPFFSS LVDYIISGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDYAIDIG RNVIHGSDSV ESANKEAALW FPDGPVNWQS SLHSWIYE

Best Arabidopsis Sequence Match ( AT4G09320.1 )
(BLAST)

001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET

Arabidopsis Description

NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.