Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 5
- mitochondrion 2
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr5P18300_001 | Banana | cytosol, unclear | 89.19 | 89.19 |
GSMUA_Achr11P... | Banana | cytosol | 84.46 | 88.03 |
Solyc01g089970.2.1 | Tomato | extracellular, plastid | 84.46 | 84.46 |
PGSC0003DMT400080042 | Potato | cytosol | 83.78 | 83.78 |
EER91919 | Sorghum | cytosol | 83.11 | 82.55 |
Zm00001d029968_P001 | Maize | plastid | 82.43 | 81.88 |
EER99399 | Sorghum | cytosol | 82.43 | 81.33 |
KRH48835 | Soybean | endoplasmic reticulum, nucleus | 81.76 | 81.21 |
KRH66485 | Soybean | endoplasmic reticulum | 81.76 | 81.21 |
CDY13081 | Canola | cytosol | 81.08 | 81.08 |
Bra027579.1-P | Field mustard | cytosol | 81.08 | 81.08 |
Zm00001d021526_P001 | Maize | cytosol, extracellular | 83.78 | 81.05 |
TraesCS1B01G230300.1 | Wheat | cytosol, plastid | 81.76 | 80.67 |
CDY71669 | Canola | cytosol, plasma membrane | 80.41 | 80.41 |
VIT_15s0021g01330.t01 | Wine grape | cytosol, extracellular | 80.41 | 80.41 |
TraesCS1D01G219000.1 | Wheat | plastid | 81.76 | 80.13 |
TraesCS1A01G217200.1 | Wheat | golgi | 81.08 | 80.0 |
Os07t0492000-01 | Rice | extracellular | 80.41 | 79.87 |
CDY42375 | Canola | cytosol | 79.05 | 79.05 |
Bra030844.1-P | Field mustard | cytosol | 79.05 | 79.05 |
HORVU1Hr1G055440.1 | Barley | cytosol, plasma membrane | 79.73 | 78.67 |
CDY10545 | Canola | cytosol | 78.38 | 78.38 |
AT4G09320.1 | Thale cress | cytosol, mitochondrion, nucleus | 78.38 | 77.85 |
Os10t0563700-01 | Rice | extracellular | 78.38 | 76.82 |
CDX93161 | Canola | cytosol | 32.43 | 76.19 |
CDY61716 | Canola | cytosol | 69.59 | 73.57 |
Solyc09g055420.1.1 | Tomato | cytosol, unclear | 57.43 | 72.65 |
Bra013108.1-P | Field mustard | cytosol | 41.22 | 72.62 |
TraesCS4A01G213400.2 | Wheat | unclear | 78.38 | 60.1 |
TraesCS4B01G102400.2 | Wheat | cytosol | 77.7 | 59.59 |
TraesCS4D01G099200.2 | Wheat | cytosol | 77.03 | 59.07 |
KXG23408 | Sorghum | plastid | 26.35 | 49.37 |
VIT_19s0085g00080.t01 | Wine grape | cytosol, mitochondrion | 34.46 | 48.57 |
GSMUA_AchrUn_... | Banana | plastid | 61.49 | 38.89 |
GSMUA_Achr4P01100_001 | Banana | mitochondrion | 59.46 | 36.97 |
GSMUA_Achr1P11560_001 | Banana | mitochondrion | 58.78 | 36.71 |
GSMUA_Achr3P05930_001 | Banana | endoplasmic reticulum | 35.14 | 30.06 |
Protein Annotations
KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:6.3.2.4 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004550 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 |
GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr8G15010_001 |
EnsemblPlants:GSMUA_Achr8P15010_001 | EnsemblPlants:GSMUA_Achr8T15010_001 | InterPro:IPR036850 | UniProt:M0TQK4 | HAMAP:MF_00451 | InterPro:NDK-like_dom |
InterPro:NDK-like_dom_sf | InterPro:Nucleoside_diP_kinase | InterPro:Nucleoside_diP_kinase_AS | PFAM:PF00334 | PRINTS:PR01243 | ScanProsite:PS00469 |
PANTHER:PTHR11349 | PANTHER:PTHR11349:SF66 | SMART:SM00562 | SUPFAM:SSF54919 | UniParc:UPI0002951E16 | : |
Description
Nucleoside diphosphate kinase B [Source:GMGC_GENE;Acc:GSMUA_Achr8G15010_001]
Coordinates
chr8:+:12542411..12544684
Molecular Weight (calculated)
16534.0 Da
IEP (calculated)
8.854
GRAVY (calculated)
-0.089
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQTFIMIKP DGVQRGLVGE IISRFEKKGF YLKGLKMMNV DRSFAQTHYA DLSAKPFFPG LVEYIISGPV VAMVWEGKNV VVTGRKIIGA TNPSDSSPGT
101: IRGDYAIVMG RNVIHGSDSI ESARKEIALW FPEGIAQWQS NLHPWIYE
101: IRGDYAIVMG RNVIHGSDSI ESARKEIALW FPEGIAQWQS NLHPWIYE
001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
Arabidopsis Description
NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.