Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013108.1-P | Field mustard | cytosol | 90.48 | 67.86 |
| CDY71669 | Canola | cytosol, plasma membrane | 92.06 | 39.19 |
| CDY13081 | Canola | cytosol | 92.06 | 39.19 |
| CDY42375 | Canola | cytosol | 88.89 | 37.84 |
| CDY10545 | Canola | cytosol | 87.3 | 37.16 |
| PGSC0003DMT400080042 | Potato | cytosol | 85.71 | 36.49 |
| Solyc01g089970.2.1 | Tomato | extracellular, plastid | 84.13 | 35.81 |
| KRH66485 | Soybean | endoplasmic reticulum | 84.13 | 35.57 |
| GSMUA_Achr11P... | Banana | cytosol | 79.37 | 35.21 |
| KRH48835 | Soybean | endoplasmic reticulum, nucleus | 82.54 | 34.9 |
| VIT_15s0021g01330.t01 | Wine grape | cytosol, extracellular | 80.95 | 34.46 |
| CDY61716 | Canola | cytosol | 76.19 | 34.29 |
| GSMUA_Achr5P18300_001 | Banana | cytosol, unclear | 77.78 | 33.11 |
| GSMUA_Achr8P15010_001 | Banana | cytosol | 76.19 | 32.43 |
| AT4G09320.1 | Thale cress | cytosol, mitochondrion, nucleus | 76.19 | 32.21 |
| EER91919 | Sorghum | cytosol | 76.19 | 32.21 |
| Zm00001d029968_P001 | Maize | plastid | 74.6 | 31.54 |
| Os10t0563700-01 | Rice | extracellular | 71.43 | 29.8 |
| TraesCS1B01G230300.1 | Wheat | cytosol, plastid | 69.84 | 29.33 |
| TraesCS1A01G217200.1 | Wheat | golgi | 69.84 | 29.33 |
| TraesCS1D01G219000.1 | Wheat | plastid | 69.84 | 29.14 |
| EER99399 | Sorghum | cytosol | 68.25 | 28.67 |
| HORVU1Hr1G055440.1 | Barley | cytosol, plasma membrane | 68.25 | 28.67 |
| Os07t0492000-01 | Rice | extracellular | 66.67 | 28.19 |
| Zm00001d021526_P001 | Maize | cytosol, extracellular | 68.25 | 28.1 |
| Solyc09g055420.1.1 | Tomato | cytosol, unclear | 46.03 | 24.79 |
| TraesCS4A01G213400.2 | Wheat | unclear | 69.84 | 22.8 |
| KXG23408 | Sorghum | plastid | 28.57 | 22.78 |
| TraesCS4B01G102400.2 | Wheat | cytosol | 68.25 | 22.28 |
| TraesCS4D01G099200.2 | Wheat | cytosol | 66.67 | 21.76 |
| CDY41513 | Canola | plastid | 63.49 | 17.24 |
| CDY48138 | Canola | plastid | 61.9 | 16.96 |
| CDX84395 | Canola | plastid | 61.9 | 16.81 |
| CDX94238 | Canola | plastid | 58.73 | 15.74 |
| CDY25267 | Canola | plastid | 58.73 | 15.74 |
| CDX86826 | Canola | mitochondrion | 57.14 | 15.25 |
| CDY03508 | Canola | mitochondrion, plastid | 57.14 | 15.19 |
| CDY47613 | Canola | mitochondrion | 53.97 | 14.35 |
| CDY66964 | Canola | endoplasmic reticulum | 38.1 | 13.64 |
| CDX96770 | Canola | endoplasmic reticulum | 38.1 | 13.56 |
| CDY40857 | Canola | endoplasmic reticulum, golgi | 53.97 | 10.15 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:50.2.7 | GO:A0A078DV48 |
| EnsemblPlants:CDX93161 | ProteinID:CDX93161 | ProteinID:CDX93161.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004550 |
| GO:GO:0006139 | GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00155090001 |
| InterPro:IPR036850 | InterPro:NDK-like_dom | InterPro:NDK-like_dom_sf | InterPro:Nucleoside_diP_kinase | PFAM:PF00334 | PRINTS:PR01243 |
| PANTHER:PTHR11349 | PANTHER:PTHR11349:SF66 | MetaCyc:PWY-6545 | MetaCyc:PWY-7176 | MetaCyc:PWY-7184 | MetaCyc:PWY-7187 |
| MetaCyc:PWY-7197 | MetaCyc:PWY-7198 | MetaCyc:PWY-7205 | MetaCyc:PWY-7210 | MetaCyc:PWY-7220 | MetaCyc:PWY-7221 |
| MetaCyc:PWY-7222 | MetaCyc:PWY-7224 | MetaCyc:PWY-7226 | MetaCyc:PWY-7227 | SMART:SM00562 | SUPFAM:SSF54919 |
| UniParc:UPI0004EED41C | : | : | : | : | : |
Description
BnaA03g38830D
Coordinates
chrLK031874:+:1495035..1495474
Molecular Weight (calculated)
7082.6 Da
IEP (calculated)
9.063
GRAVY (calculated)
-0.129
Length
63 amino acids
Sequence
(BLAST)
(BLAST)
1: MIKPDGVQRS LVGEIIGRFE NKGFTLKGLK LITVDRPFAE KHYQDLSANP FFNSLVDYII SGP
001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
Arabidopsis Description
NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.