CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033163.1-P	Field mustard	plastid	99.15	99.15
CDY25267	Canola	plastid	99.15	99.15
CDX86826	Canola	mitochondrion	96.6	96.19
AT4G11010.1	Thale cress	mitochondrion, plastid	94.04	92.86
Solyc06g075470.1.1	Tomato	cytosol	31.06	92.41
TraesCS1D01G452300.1	Wheat	cytosol	61.28	88.89
CDY03508	Canola	mitochondrion, plastid	86.81	86.08
CDY47613	Canola	mitochondrion	86.38	85.65
KRH41307	Soybean	mitochondrion	80.43	80.08
PGSC0003DMT400014828	Potato	mitochondrion	78.3	79.31
KRH60038	Soybean	mitochondrion	79.15	79.15
Solyc08g008340.2.1	Tomato	plastid	78.72	79.06
PGSC0003DMT400031997	Potato	extracellular	80.0	78.99
VIT_02s0025g01500.t01	Wine grape	plastid	78.72	78.72
Solyc08g082430.2.1	Tomato	plastid	79.15	78.15
GSMUA_Achr1P11560_001	Banana	mitochondrion	71.91	71.31
GSMUA_Achr4P01100_001	Banana	mitochondrion	71.06	70.17
Os05t0595400-01	Rice	plastid	71.06	69.87
Zm00001d039221_P001	Maize	mitochondrion	69.79	69.2
TraesCS1A01G444300.1	Wheat	mitochondrion, plastid	70.64	68.88
Zm00001d009774_P001	Maize	mitochondrion	69.36	68.49
KXG22725	Sorghum	mitochondrion	70.64	68.31
TraesCS1B01G478800.1	Wheat	plastid	71.06	67.34
HORVU1Hr1G095400.2	Barley	plastid	70.64	66.94
Zm00001d004713_P001	Maize	endoplasmic reticulum	51.06	62.83
CDY10545	Canola	cytosol	37.02	58.78
CDX93161	Canola	cytosol	15.74	58.73
CDY42375	Canola	cytosol	36.6	58.11
CDY13081	Canola	cytosol	36.17	57.43
CDY71669	Canola	cytosol, plasma membrane	36.17	57.43
CDY61716	Canola	cytosol	30.64	51.43
Zm00001d024444_P001	Maize	plastid	54.47	44.29
CDY41513	Canola	plastid	40.0	40.52
CDX84395	Canola	plastid	40.0	40.52
CDY48138	Canola	plastid	37.87	38.7
CDY40857	Canola	endoplasmic reticulum, golgi	45.96	32.24
CDX96770	Canola	endoplasmic reticulum	23.83	31.64
CDY66964	Canola	endoplasmic reticulum	22.98	30.68

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:A0A078E468
EnsemblPlants:CDX94238	ProteinID:CDX94238	ProteinID:CDX94238.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004550	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183
GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00157208001	InterPro:IPR036850	HAMAP:MF_00451
InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243
ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF91	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184
MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220
MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562
SUPFAM:SSF54919	UniParc:UPI0004EC14A1	SEG:seg	:	:	:

Description

BnaC02g28980D

Coordinates

chrLK031880:+:211138..213090

Molecular Weight (calculated)

25576.6 Da

IEP (calculated)

9.801

GRAVY (calculated)

-0.151

Length

235 amino acids

Sequence
(BLAST)

001: MSSQICRSAS KAARSLLSSA KNARFFSEGR AIGAAGAVTA SGKLPLYASN FARSSGSSKS WITGLLALPA AAFMVQDQEV FAAEMERTFI AIKPDGVQRG
101: LISEIISRFE RKGFKLVGIK VVVPSKDFAQ KHYHDLKERP FFNGLCDFLS SGPVIAMVWE GEGVIRYGRK LIGATDPQKS EPGTIRGDLA VVVGRNIIHG
201: SDGPETAKDE INLWFKPQEL VSYTNNAEKW IYGDN

Best Arabidopsis Sequence Match ( AT4G11010.1 )
(BLAST)

001: MSSQICRSAS KAAKSLLSSA KNARFFSEGR AIGAAAAVSA SGKIPLYASN FARSSGSGVA SKSWITGLLA LPAAAYMIQD QEVLAAEMER TFIAIKPDGV
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN

Arabidopsis Description

NDPK3Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UTZ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.