Factsheet for TraesCS1A01G444300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G452300.1	Wheat	cytosol	66.81	99.38
Solyc06g075470.1.1	Tomato	cytosol	30.29	92.41
TraesCS1B01G478800.1	Wheat	plastid	93.36	90.73
HORVU1Hr1G095400.2	Barley	plastid	92.95	90.32
Os05t0595400-01	Rice	plastid	80.91	81.59
Zm00001d009774_P001	Maize	mitochondrion	79.25	80.25
KXG22725	Sorghum	mitochondrion	79.67	79.01
Zm00001d039221_P001	Maize	mitochondrion	75.93	77.22
PGSC0003DMT400014828	Potato	mitochondrion	69.29	71.98
Solyc08g008340.2.1	Tomato	plastid	68.88	70.94
VIT_02s0025g01500.t01	Wine grape	plastid	68.88	70.64
CDX94238	Canola	plastid	68.88	70.64
KRH60038	Soybean	mitochondrion	68.88	70.64
Solyc08g082430.2.1	Tomato	plastid	69.71	70.59
PGSC0003DMT400031997	Potato	extracellular	69.71	70.59
CDY25267	Canola	plastid	68.46	70.21
Bra033163.1-P	Field mustard	plastid	68.46	70.21
Bra035260.1-P	Field mustard	mitochondrion	68.46	69.92
CDX86826	Canola	mitochondrion	68.46	69.92
KRH41307	Soybean	mitochondrion	67.63	69.07
GSMUA_Achr4P01100_001	Banana	mitochondrion	68.05	68.91
AT4G23900.1	Thale cress	mitochondrion	67.63	68.78
GSMUA_Achr1P11560_001	Banana	mitochondrion	67.22	68.35
AT4G11010.1	Thale cress	mitochondrion, plastid	67.22	68.07
CDY47613	Canola	mitochondrion	65.56	66.67
CDY03508	Canola	mitochondrion, plastid	65.56	66.67
Bra013742.1-P	Field mustard	mitochondrion	65.15	66.24
Zm00001d004713_P001	Maize	endoplasmic reticulum	52.28	65.97
TraesCS1A01G217200.1	Wheat	golgi	36.51	58.67
Zm00001d024444_P001	Maize	plastid	56.02	46.71
TraesCS4A01G213400.2	Wheat	unclear	36.1	45.08
TraesCS5A01G092400.1	Wheat	plastid	38.17	41.63
AT4G23895.3	Thale cress	cytosol	67.63	34.9
CDY40857	Canola	endoplasmic reticulum, golgi	37.76	27.16
TraesCS7A01G380500.1	Wheat	endoplasmic reticulum	19.92	26.67

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228
GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	InterPro:IPR036850	HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase
InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF91
SMART:SM00562	SUPFAM:SSF54919	EnsemblPlantsGene:TraesCS1A01G444300	EnsemblPlants:TraesCS1A01G444300.1	TIGR:cd04413	SEG:seg

Description

No Description!

Coordinates

chr1A:-:592313342..592316549

Molecular Weight (calculated)

26131.2 Da

IEP (calculated)

8.990

GRAVY (calculated)

-0.126

Length

241 amino acids

Sequence
(BLAST)

001: MSKLFHSACK AARSLIASSS APAPRAASSL LADGRNAALA TLANLGRNST LPAAYAHHLH TNASSHGYAW IAAIPAAAYM LQDQDVHAAE MERTFIAIKP
101: DGVQRGLISE IVSRFERKGY KLVAIKLVVP SKQFAEKHYH DLKERPFFSG LCDFLSSGPV LAMVWEGEGV IKYGRKLIGA TDPSKSEPGT IRGDLAVVVG
201: RNIIHGSDGP ETAKDEIALW FQPKELVSYT SNEEKWIYGV N

Best Arabidopsis Sequence Match ( AT4G11010.1 )
(BLAST)

001: MSSQICRSAS KAAKSLLSSA KNARFFSEGR AIGAAAAVSA SGKIPLYASN FARSSGSGVA SKSWITGLLA LPAAAYMIQD QEVLAAEMER TFIAIKPDGV
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN

Arabidopsis Description

NDPK3Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UTZ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.