CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033163.1-P	Field mustard	plastid	100.0	100.0
CDX94238	Canola	plastid	99.15	99.15
CDX86826	Canola	mitochondrion	96.17	95.76
AT4G11010.1	Thale cress	mitochondrion, plastid	94.47	93.28
Solyc06g075470.1.1	Tomato	cytosol	31.06	92.41
TraesCS1D01G452300.1	Wheat	cytosol	61.28	88.89
CDY03508	Canola	mitochondrion, plastid	86.81	86.08
CDY47613	Canola	mitochondrion	86.38	85.65
KRH41307	Soybean	mitochondrion	80.85	80.51
Solyc08g008340.2.1	Tomato	plastid	79.15	79.49
PGSC0003DMT400031997	Potato	extracellular	80.43	79.41
PGSC0003DMT400014828	Potato	mitochondrion	78.3	79.31
KRH60038	Soybean	mitochondrion	79.15	79.15
VIT_02s0025g01500.t01	Wine grape	plastid	79.15	79.15
Solyc08g082430.2.1	Tomato	plastid	79.57	78.57
GSMUA_Achr1P11560_001	Banana	mitochondrion	71.91	71.31
GSMUA_Achr4P01100_001	Banana	mitochondrion	71.06	70.17
Os05t0595400-01	Rice	plastid	70.64	69.46
Zm00001d039221_P001	Maize	mitochondrion	69.36	68.78
TraesCS1A01G444300.1	Wheat	mitochondrion, plastid	70.21	68.46
Zm00001d009774_P001	Maize	mitochondrion	68.94	68.07
KXG22725	Sorghum	mitochondrion	70.21	67.9
TraesCS1B01G478800.1	Wheat	plastid	70.64	66.94
HORVU1Hr1G095400.2	Barley	plastid	70.21	66.53
Zm00001d004713_P001	Maize	endoplasmic reticulum	51.06	62.83
CDY10545	Canola	cytosol	37.02	58.78
CDX93161	Canola	cytosol	15.74	58.73
CDY42375	Canola	cytosol	36.6	58.11
CDY13081	Canola	cytosol	36.17	57.43
CDY71669	Canola	cytosol, plasma membrane	36.17	57.43
CDY61716	Canola	cytosol	30.64	51.43
Zm00001d024444_P001	Maize	plastid	54.89	44.64
CDY41513	Canola	plastid	40.0	40.52
CDX84395	Canola	plastid	40.0	40.52
CDY48138	Canola	plastid	37.87	38.7
CDY40857	Canola	endoplasmic reticulum, golgi	45.53	31.94
CDX96770	Canola	endoplasmic reticulum	23.83	31.64
CDY66964	Canola	endoplasmic reticulum	22.98	30.68

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:A0A078GJ98
UniProt:A0A078GJ98	EnsemblPlants:CDY25267	ProteinID:CDY25267	ProteinID:CDY25267.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006165
GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00029319001	InterPro:IPR036850
HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334
PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF91	MetaCyc:PWY-6545	MetaCyc:PWY-7176
MetaCyc:PWY-7184	MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210
MetaCyc:PWY-7220	MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227
SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI00025455CA	SEG:seg	:	:

Description

BnaA02g21890DNucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078GJ98]

Coordinates

chrLK032172:-:329921..331779

Molecular Weight (calculated)

25608.7 Da

IEP (calculated)

9.801

GRAVY (calculated)

-0.149

Length

235 amino acids

Sequence
(BLAST)

001: MSSQICRSAS KAARSLLSSA KNARFFSEGR AIGAAAAVTA SGKMPLYASN FARSSGSSKS WITGLLALPA AAFMVQDQEV FAAEMERTFI AIKPDGVQRG
101: LISEIISRFE RKGFKLVGIK VVVPSKDFAQ KHYHDLKERP FFNGLCDFLS SGPVIAMVWE GEGVIRYGRK LIGATDPQKS EPGTIRGDLA VVVGRNIIHG
201: SDGPETAKDE INLWFKPQEL VSYTNNAEKW IYGDN

Best Arabidopsis Sequence Match ( AT4G11010.1 )
(BLAST)

001: MSSQICRSAS KAAKSLLSSA KNARFFSEGR AIGAAAAVSA SGKIPLYASN FARSSGSGVA SKSWITGLLA LPAAAYMIQD QEVLAAEMER TFIAIKPDGV
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN

Arabidopsis Description

NDPK3Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UTZ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.