CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71669	Canola	cytosol, plasma membrane	94.29	89.19
CDY13081	Canola	cytosol	93.57	88.51
CDY42375	Canola	cytosol	90.71	85.81
CDY10545	Canola	cytosol	90.0	85.14
KRH48835	Soybean	endoplasmic reticulum, nucleus	85.0	79.87
KRH66485	Soybean	endoplasmic reticulum	83.57	78.52
AT4G09320.1	Thale cress	cytosol, mitochondrion, nucleus	83.57	78.52
CDX93161	Canola	cytosol	34.29	76.19
Solyc01g089970.2.1	Tomato	extracellular, plastid	78.57	74.32
PGSC0003DMT400080042	Potato	cytosol	78.57	74.32
VIT_15s0021g01330.t01	Wine grape	cytosol, extracellular	77.14	72.97
GSMUA_Achr11P...	Banana	cytosol	73.57	72.54
Zm00001d029968_P001	Maize	plastid	76.43	71.81
EER91919	Sorghum	cytosol	76.43	71.81
GSMUA_Achr5P18300_001	Banana	cytosol, unclear	74.29	70.27
GSMUA_Achr8P15010_001	Banana	cytosol	73.57	69.59
TraesCS1B01G230300.1	Wheat	cytosol, plastid	73.57	68.67
TraesCS1A01G217200.1	Wheat	golgi	73.57	68.67
TraesCS1D01G219000.1	Wheat	plastid	73.57	68.21
HORVU1Hr1G055440.1	Barley	cytosol, plasma membrane	72.14	67.33
Os10t0563700-01	Rice	extracellular	70.71	65.56
EER99399	Sorghum	cytosol	66.43	62.0
Zm00001d021526_P001	Maize	cytosol, extracellular	65.71	60.13
Os07t0492000-01	Rice	extracellular	62.86	59.06
Solyc09g055420.1.1	Tomato	cytosol, unclear	47.86	57.27
KXG23408	Sorghum	plastid	27.86	49.37
TraesCS4A01G213400.2	Wheat	unclear	65.0	47.15
TraesCS4B01G102400.2	Wheat	cytosol	64.29	46.63
TraesCS4D01G099200.2	Wheat	cytosol	63.57	46.11
CDX84395	Canola	plastid	56.43	34.05
CDY41513	Canola	plastid	56.43	34.05
CDY48138	Canola	plastid	55.71	33.91
CDX94238	Canola	plastid	51.43	30.64
CDY25267	Canola	plastid	51.43	30.64
CDX86826	Canola	mitochondrion	50.71	30.08
CDY03508	Canola	mitochondrion, plastid	50.71	29.96
CDY47613	Canola	mitochondrion	50.71	29.96
CDY66964	Canola	endoplasmic reticulum	30.71	24.43
CDX96770	Canola	endoplasmic reticulum	30.71	24.29
CDY40857	Canola	endoplasmic reticulum, golgi	22.86	9.55

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:A0A078J8I9
UniProt:A0A078J8I9	EnsemblPlants:CDY61716	ProteinID:CDY61716	ProteinID:CDY61716.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006165
GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00034263001	InterPro:IPR036850
InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243
ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF66	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184
MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220
MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562
SUPFAM:SSF54919	UniParc:UPI0004EE5A44	:	:	:	:

Description

BnaC09g51980DNucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078J8I9]

Coordinates

chrLK034031:-:13725..15645

Molecular Weight (calculated)

15472.6 Da

IEP (calculated)

6.250

GRAVY (calculated)

0.029

Length

140 amino acids

Sequence
(BLAST)

001: MLFNSVLECV GEIICRFEKK GFTLKGLKLI TVDRPFAEKH YQDLSAKPFF SSLVDYIISG PVVAMIWEGK NVVLTGRKII GATNPAASEP GTIRGDFAID
101: IGRNVIHGSD SVESANKEAA LWFPDGPVNW QSSLHSWIYE

Best Arabidopsis Sequence Match ( AT4G09320.1 )
(BLAST)

001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET

Arabidopsis Description

NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.