Factsheet for Zm00001d021526_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99399	Sorghum	cytosol	95.42	97.33
Os07t0492000-01	Rice	extracellular	91.5	93.96
GSMUA_Achr8P15010_001	Banana	cytosol	81.05	83.78
GSMUA_Achr5P18300_001	Banana	cytosol, unclear	78.43	81.08
GSMUA_Achr11P...	Banana	cytosol	73.2	78.87
Zm00001d029968_P001	Maize	plastid	75.82	77.85
Solyc01g089970.2.1	Tomato	extracellular, plastid	74.51	77.03
PGSC0003DMT400080042	Potato	cytosol	73.86	76.35
VIT_15s0021g01330.t01	Wine grape	cytosol, extracellular	72.55	75.0
KRH48835	Soybean	endoplasmic reticulum, nucleus	72.55	74.5
CDY13081	Canola	cytosol	71.24	73.65
Bra027579.1-P	Field mustard	cytosol	71.24	73.65
KRH66485	Soybean	endoplasmic reticulum	71.24	73.15
AT4G09320.1	Thale cress	cytosol, mitochondrion, nucleus	71.24	73.15
CDY71669	Canola	cytosol, plasma membrane	70.59	72.97
CDY10545	Canola	cytosol	70.59	72.97
CDY42375	Canola	cytosol	69.93	72.3
Bra030844.1-P	Field mustard	cytosol	69.93	72.3
TraesCS4B01G102400.2	Wheat	cytosol	90.2	71.5
TraesCS4A01G213400.2	Wheat	unclear	89.54	70.98
TraesCS4D01G099200.2	Wheat	cytosol	89.54	70.98
Solyc09g055420.1.1	Tomato	cytosol, unclear	52.29	68.38
CDX93161	Canola	cytosol	28.1	68.25
CDY61716	Canola	cytosol	60.13	65.71
Bra013108.1-P	Field mustard	cytosol	35.95	65.48
VIT_19s0085g00080.t01	Wine grape	cytosol, mitochondrion	30.72	44.76
Zm00001d023833_P001	Maize	plastid	63.4	40.93
Zm00001d009774_P001	Maize	mitochondrion	54.9	35.29
Zm00001d004713_P001	Maize	endoplasmic reticulum	43.79	35.08
Zm00001d039221_P001	Maize	mitochondrion	53.59	34.6
Zm00001d050827_P003	Maize	endoplasmic reticulum	33.99	27.81
Zm00001d024444_P001	Maize	plastid	45.1	23.88

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	EntrezGene:100381602	Gene3D:3.30.70.141	MapMan:6.3.2.4
UniProt:A0A1D6IBV3	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	InterPro:IPR036850	HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase
InterPro:Nucleoside_diP_kinase_AS	ProteinID:ONM57403.1	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349
PANTHER:PTHR11349:SF66	SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI000843975B	EnsemblPlantsGene:Zm00001d021526	EnsemblPlants:Zm00001d021526_P001
EnsemblPlants:Zm00001d021526_T001	:	:	:	:	:

Description

nucleotide diphosphate kinase1Nucleoside diphosphate kinase family protein

Coordinates

chr7:-:155153847..155156140

Molecular Weight (calculated)

17290.9 Da

IEP (calculated)

7.762

GRAVY (calculated)

-0.152

Length

153 amino acids

Sequence
(BLAST)

001: MEQTFIMIKP DGVQRGLFLA QIGDIISRFE KKGFYLKGMK FMNVERSFAQ QHYADLSDKP FFPGLVEYII SGPVVAMVWE GKDVVLTGRR IIGATRPWEA
101: APGTIRGDYA VEVGRNVIHG SDSVENGKKE IALWFPEGVA QWKSNLHPWI YEA

Best Arabidopsis Sequence Match ( AT4G09320.1 )
(BLAST)

001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET

Arabidopsis Description

NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.