Factsheet for Bra030844.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 5
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42375	Canola	cytosol	100.0	100.0
CDY10545	Canola	cytosol	99.32	99.32
Bra027579.1-P	Field mustard	cytosol	95.95	95.95
KRH48835	Soybean	endoplasmic reticulum, nucleus	89.19	88.59
AT4G09320.1	Thale cress	cytosol, mitochondrion, nucleus	88.51	87.92
KRH66485	Soybean	endoplasmic reticulum	87.16	86.58
Solyc01g089970.2.1	Tomato	extracellular, plastid	83.78	83.78
PGSC0003DMT400080042	Potato	cytosol	83.78	83.78
Bra013108.1-P	Field mustard	cytosol	47.3	83.33
VIT_15s0021g01330.t01	Wine grape	cytosol, extracellular	81.76	81.76
EER91919	Sorghum	cytosol	81.08	80.54
Zm00001d029968_P001	Maize	plastid	81.08	80.54
GSMUA_Achr5P18300_001	Banana	cytosol, unclear	79.73	79.73
GSMUA_Achr8P15010_001	Banana	cytosol	79.05	79.05
GSMUA_Achr11P...	Banana	cytosol	75.68	78.87
TraesCS1B01G230300.1	Wheat	cytosol, plastid	77.7	76.67
TraesCS1A01G217200.1	Wheat	golgi	77.7	76.67
TraesCS1D01G219000.1	Wheat	plastid	77.7	76.16
HORVU1Hr1G055440.1	Barley	cytosol, plasma membrane	76.35	75.33
Os10t0563700-01	Rice	extracellular	74.32	72.85
Solyc09g055420.1.1	Tomato	cytosol, unclear	56.08	70.94
EER99399	Sorghum	cytosol	71.62	70.67
Zm00001d021526_P001	Maize	cytosol, extracellular	72.3	69.93
Os07t0492000-01	Rice	extracellular	68.92	68.46
TraesCS4A01G213400.2	Wheat	unclear	70.95	54.4
TraesCS4B01G102400.2	Wheat	cytosol	70.27	53.89
TraesCS4D01G099200.2	Wheat	cytosol	69.59	53.37
KXG23408	Sorghum	plastid	27.03	50.63
Bra038621.1-P	Field mustard	plastid	58.78	37.5
Bra033163.1-P	Field mustard	plastid	58.11	36.6
Bra035260.1-P	Field mustard	mitochondrion	57.43	36.02
Bra013742.1-P	Field mustard	mitochondrion	57.43	35.87

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	EnsemblPlantsGene:Bra030844
EnsemblPlants:Bra030844.1	EnsemblPlants:Bra030844.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228
GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	InterPro:IPR036850	UniProt:M4EPX3	HAMAP:MF_00451	InterPro:NDK-like_dom
InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469
PANTHER:PTHR11349	PANTHER:PTHR11349:SF66	SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI0001BA6476	:

Description

AT4G09320 (E=1e-076) NDPK1 | NDPK1; ATP binding / nucleoside diphosphate kinase

Coordinates

chrA08:+:209601..210287

Molecular Weight (calculated)

16395.8 Da

IEP (calculated)

6.783

GRAVY (calculated)

-0.049

Length

148 amino acids

Sequence
(BLAST)

001: MEQTFIMIKP DGVQRGLVGQ IICRFEQKGF TLKGLKLITV DRPFAEKHYQ DLSAKPFFSG LVDYIISGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNIIHGSDSV ESANKECALW FPDGPVNWQS SLHSWIYE

Best Arabidopsis Sequence Match ( AT4G09320.1 )
(BLAST)

001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET

Arabidopsis Description

NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.