Factsheet for Bra038621.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000326.1-P
Bra004784.1-P
Bra006216.1-P
Bra007146.1-P
Bra008801.1-P
Bra014771.1-P
Bra025613.1-P
Bra025617.1-P
Bra028912.1-P
Bra038281.1-P
Bra038621.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63310.1	Bra025617.1-P	AT2G04630.1	21798944
AT5G63310.1	Bra000326.1-P	AT2G43790.1	12506203
AT5G63310.1	Bra004784.1-P	AT2G43790.1	12506203
AT5G63310.1	Bra038281.1-P	AT3G45640.1	12506203
AT5G63310.1	Bra007146.1-P	AT3G55150.1	21798944
AT5G63310.1	Bra014771.1-P	AT3G55150.1	21798944
AT5G63310.1	Bra028912.1-P	AT5G01820.1	17785451
AT5G63310.1	Bra006216.1-P	AT5G13810.1	21798944
AT5G63310.1	Bra008801.1-P	AT5G13810.1	21798944
AT5G63310.1	Bra025613.1-P	AT5G35410.1	17785451
AT5G63310.1	Bra038621.1-P	AT5G63310.1	17785451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41513	Canola	plastid	97.41	97.41
AT5G63310.1	Thale cress	plastid	85.78	86.15
PGSC0003DMT400039453	Potato	cytosol	51.29	73.01
Solyc06g071960.2.1	Tomato	plastid	66.81	69.2
VIT_17s0000g10280.t01	Wine grape	plastid	67.67	68.26
PGSC0003DMT400069352	Potato	mitochondrion	65.09	67.41
KRH57193	Soybean	plastid	65.09	67.11
KRH03909	Soybean	plastid	65.09	66.52
Solyc03g110960.2.1	Tomato	plastid	65.52	65.24
KRH16591	Soybean	mitochondrion	54.31	64.62
GSMUA_AchrUn_...	Banana	plastid	64.22	63.68
Os12t0548300-01	Rice	plastid	58.62	61.82
TraesCS5B01G098300.2	Wheat	cytosol	45.69	61.63
TraesCS5D01G104600.2	Wheat	plastid	56.9	60.0
Bra027579.1-P	Field mustard	cytosol	37.93	59.46
EES16135	Sorghum	plastid	56.9	59.46
TraesCS5A01G092400.1	Wheat	plastid	56.47	59.28
Bra030844.1-P	Field mustard	cytosol	37.5	58.78
KRG89746	Soybean	plastid	56.03	58.04
Bra013108.1-P	Field mustard	cytosol	20.69	57.14
Zm00001d023833_P001	Maize	plastid	56.03	54.85
HORVU5Hr1G024250.1	Barley	mitochondrion	57.33	53.63
Bra033163.1-P	Field mustard	plastid	40.52	40.0
Bra035260.1-P	Field mustard	mitochondrion	40.09	39.41
Bra013742.1-P	Field mustard	mitochondrion	39.66	38.82

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	EnsemblPlantsGene:Bra038621
EnsemblPlants:Bra038621.1	EnsemblPlants:Bra038621.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009585	GO:GO:0009605
GO:GO:0009628	GO:GO:0009719	GO:GO:0009734	GO:GO:0009941	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0042542	InterPro:IPR036850	UniProt:M4FC05	HAMAP:MF_00451
InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243
ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF44	SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI000253F251

Description

AT5G63310 (E=5e-108) NDPK2, NDPK1A, NDPK IA IA, NDPK IA, ATNDPK2 | NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2); ATP binding / nucleoside diphosphate kinase/ protein binding

Coordinates

chrA06:-:14221239..14222795

Molecular Weight (calculated)

25549.0 Da

IEP (calculated)

8.690

GRAVY (calculated)

-0.078

Length

232 amino acids

Sequence
(BLAST)

001: MVGMAVVGQW TLCAASPSPI VKSATCNSNS CPTTVNLRTE LAAFRPQFRL FSRVSPTRRR RLCASSSADL GIFLPHLVAS MEQVEETYIM VKPDGIQRGL
101: VGEIISRFER KGFKLIGLKM FQCPKELAEE HYKDLSAKSF FPSLIEYITS GPVVCMAWEG VGVVASARKL IGKTDPLQAE PGTIRGDLAV QTGRNIVHGS
201: DSPENGKREI ALWFKEGELC GWDSALAKWL RE

Best Arabidopsis Sequence Match ( AT5G63310.1 )
(BLAST)

001: MVGATVVSKW TPLCVASPPE RNSASLNPHC SPARVNFRTA LAAFRPQFRL FSRNSASRRR LRASSSAESG IFLPHLVASM EDVEETYIMV KPDGIQRGLV
101: GEIISRFEKK GFKLIGLKMF QCPKELAEEH YKDLSAKSFF PNLIEYITSG PVVCMAWEGV GVVASARKLI GKTDPLQAEP GTIRGDLAVQ TGRNIVHGSD
201: SPENGKREIG LWFKEGELCK WDSALATWLR E

Arabidopsis Description

NDPK2Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:Q0WUG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.