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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 6
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:nucleus, plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002000.1-P
Bra002640.1-P
Bra002804.1-P
Bra004677.1-P
Bra006045.1-P
Bra006103.1-P
Bra006865.1-P
Bra010017.1-P
Bra010267.1-P
Bra011233.1-P
Bra012351.1-P
Bra014545.1-P
Bra019509.1-P
Bra020363.1-P
Bra023170.1-P
Bra024036.1-P
Bra024548.1-P
Bra027888.1-P
Bra033788.1-P
Bra036121.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13810.1 Bra012351.1-P AT1G22920.1 21798944
AT5G13810.1 Bra024548.1-P AT1G22920.1 21798944
AT5G13810.1 Bra023170.1-P AT1G31240.1 21798944
AT5G13810.1 Bra027888.1-P AT1G58070.1 21798944
AT5G13810.1 Bra002000.1-P AT2G16880.1 21798944
AT5G13810.1 Bra004677.1-P AT2G42260.1 21798944
AT5G13810.1 Bra019509.1-P AT3G47640.1 21798944
AT5G13810.1 Bra033788.1-P AT3G47640.1 21798944
AT5G13810.1 Bra010267.1-P AT4G30930.1 21798944
AT5G13810.1 Bra011233.1-P AT4G30930.1 21798944
AT5G13810.1 Bra024036.1-P AT4G30930.1 21798944
AT5G13810.1 Bra006045.1-P AT5G10060.1 21798944
AT5G13810.1 Bra006103.1-P AT5G11520.1 21798944
AT5G13810.1 Bra010017.1-P AT5G30490.1 21798944
AT5G13810.1 Bra036121.1-P AT5G30490.1 21798944
AT5G13810.1 Bra002804.1-P AT5G56600.1 21798944
AT5G13810.1 Bra006865.1-P AT5G56600.1 21798944
AT5G13810.1 Bra014545.1-P AT5G56600.1 21798944
AT5G13810.1 Bra002640.1-P AT5G58530.1 21798944
AT5G13810.1 Bra020363.1-P AT5G58530.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67732 Canola plastid 95.13 98.07
CDY70634 Canola plastid 97.38 97.38
Bra006216.1-P Field mustard plastid 82.4 83.33
AT5G13810.1 Thale cress plastid 82.02 79.93
VIT_13s0019g00340.t01 Wine grape plastid 59.18 58.96
Solyc11g005270.1.1 Tomato cytosol 40.82 57.37
KRH62918 Soybean cytosol, plastid 51.31 53.31
KRH13399 Soybean plastid 52.43 52.43
Solyc03g078380.1.1 Tomato cytosol 50.94 52.11
KRH20755 Soybean plastid 52.43 51.66
PGSC0003DMT400047487 Potato cytosol 50.94 51.52
PGSC0003DMT400015465 Potato cytosol 49.44 48.18
Bra002640.1-P Field mustard cytosol 19.1 43.22
Bra005786.1-P Field mustard cytosol 15.73 38.53
Bra020363.1-P Field mustard cytosol, plastid 35.21 37.3
Bra004972.1-P Field mustard mitochondrion 27.34 29.55
Bra009197.1-P Field mustard cytosol 26.22 28.93
Bra016941.1-P Field mustard plastid 39.33 28.53
Bra005898.1-P Field mustard cytosol, mitochondrion 25.84 27.94
Bra007299.1-P Field mustard plastid 41.2 27.85
Bra004971.1-P Field mustard plastid 25.84 27.27
Bra000225.1-P Field mustard plastid 39.33 26.18
Bra014646.1-P Field mustard plastid 37.45 25.45
Bra023284.1-P Field mustard cytosol 27.34 24.33
Bra000716.1-P Field mustard cytosol 27.34 23.55
Bra033062.1-P Field mustard cytosol 29.59 23.44
Bra028812.1-P Field mustard nucleus 30.34 23.21
Bra039044.1-P Field mustard cytosol 34.08 21.56
Bra040917.1-P Field mustard cytosol 28.84 21.39
Bra025638.1-P Field mustard cytosol 32.21 20.98
Bra025357.1-P Field mustard cytosol 32.21 20.92
Bra028902.1-P Field mustard mitochondrion 27.34 20.39
Protein Annotations
Gene3D:3.40.30.10MapMan:35.1EnsemblPlantsGene:Bra008801EnsemblPlants:Bra008801.1EnsemblPlants:Bra008801.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091GO:GO:0008150GO:GO:0008152
GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454
GO:GO:0055114InterPro:GlutaredoxinInterPro:IPR002109UniProt:M4CX54PFAM:PF00462PFscan:PS51354
PANTHER:PTHR10168PANTHER:PTHR10168:SF84SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI000254377BSEG:seg
Description
AT5G13810 (E=5e-119) | glutaredoxin family protein
Coordinates
chrA10:-:13892984..13893787
Molecular Weight (calculated)
29964.9 Da
IEP (calculated)
9.326
GRAVY (calculated)
-0.478
Length
267 amino acids
Sequence
(BLAST)
001: MADKTKSSSS FFNRSLTIHG HRPTDSTPKS HSLNPSLNRT TSITKFYNPV ETVVETSLKG KVKNLCRLFE GSKSSAKPTS TPPDPLQKQK SNKSVLSESR
101: LSPFLSLNNS VIRLPGTEDR IVVYFTSLRG IRRTYEDCYS VRMIFRGFRV WIDERDVSMD SAYKKELQIA MGEKSSVSLP QVFIMGKHVG GADVVKSLFE
201: IGELAKILKL FPVREPGFVC RCCGDARFIP CSNCSGSKKL YDEDEDRHKR CPECNENGLI RCPDCSS
Best Arabidopsis Sequence Match ( AT5G13810.1 )
(BLAST)
001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
Arabidopsis Description
AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.