Factsheet for Bra006865.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88579	Canola	cytosol	95.52	96.97
Bra002804.1-P	Field mustard	cytosol	87.31	89.31
AT5G56600.1	Thale cress	cytosol	81.34	83.21
Bra039018.1-P	Field mustard	cytosol	79.85	81.68
Bra036707.1-P	Field mustard	cytosol	79.85	81.68
Bra031097.1-P	Field mustard	cytosol	79.85	81.68
HORVU1Hr1G075600.2	Barley	cytosol	26.12	77.78
Bra011099.1-P	Field mustard	cytosol	75.37	77.1
Bra011098.1-P	Field mustard	cytosol	76.12	76.12
Bra024148.1-P	Field mustard	cytosol	76.12	76.12
Bra039019.1-P	Field mustard	cytosol	76.12	76.12
EER87860	Sorghum	cytosol	73.88	75.57
HORVU1Hr1G075570.2	Barley	cytosol	73.88	75.57
Bra031101.1-P	Field mustard	cytosol	75.37	75.37
TraesCS1B01G356700.1	Wheat	cytosol	73.13	74.81
Bra010331.1-P	Field mustard	cytosol	74.63	74.63
EES01452	Sorghum	cytosol	72.39	74.05
Os10t0323900-01	Rice	cytosol, plasma membrane	72.39	74.05
Os10t0323600-01	Rice	cytosol	72.39	74.05
Bra036705.1-P	Field mustard	cytosol	73.88	73.88
TraesCS3B01G311200.1	Wheat	cytosol	71.64	73.28
OQU78328	Sorghum	cytosol	46.27	72.94
Zm00001d043523_P001	Maize	cytosol	71.64	72.73
Os06t0152100-01	Rice	extracellular	70.9	72.52
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	70.9	72.52
Zm00001d012772_P001	Maize	cytosol	70.15	71.76
EES19838	Sorghum	cytosol	70.15	71.76
Zm00001d012773_P003	Maize	cytosol	70.15	71.21
TraesCS1A01G343400.1	Wheat	cytosol	73.13	68.06
Zm00001d038783_P001	Maize	cytosol	66.42	67.94
TraesCS7D01G101800.1	Wheat	cytosol	72.39	67.36
TraesCS3A01G277000.1	Wheat	cytosol	70.9	65.97
HORVU7Hr1G040070.1	Barley	cytosol	21.64	65.91
Zm00001d010797_P001	Maize	cytosol	67.16	65.69
TraesCS3D01G277200.1	Wheat	cytosol	71.64	58.9
HORVU3Hr1G070490.1	Barley	mitochondrion	71.64	57.48
HORVU7Hr1G022570.1	Barley	cytosol, plastid	72.39	53.89
Zm00001d036213_P002	Maize	cytosol	52.99	44.1
HORVU2Hr1G073450.7	Barley	extracellular	33.58	34.62
Bra014545.1-P	Field mustard	cytosol	48.51	31.71
HORVU3Hr1G070510.2	Barley	cytosol	29.85	30.08
HORVU2Hr1G048590.3	Barley	plastid	29.85	26.49
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	24.63	22.92

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EnsemblPlantsGene:Bra006865	EnsemblPlants:Bra006865.1	EnsemblPlants:Bra006865.1-P	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	UniProt:M4CRM4	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI000253FD85	:	:	:	:

Description

AT5G56600 (E=8e-059) PFN3, PRF3 | PRF3 (PROFILIN 3); actin binding

Coordinates

chrA03:+:5403804..5404493

Molecular Weight (calculated)

14475.3 Da

IEP (calculated)

4.280

GRAVY (calculated)

-0.147

Length

134 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCDLGDDQR LTAAAIIGQD GNVWAQSATF PQLKPEEIEG INKDFTEPGT LAPTGLFING AKYMVIQGEP NAVNVIRGKK GAGGVTIKKT
101: TQALVFGIYE DPVTPGQCNM VVERLGDYLI ESGL

Best Arabidopsis Sequence Match ( AT5G56600.1 )
(BLAST)

001: MSWQTYVDDH LMCDVAGNRL TAAAILGQDG SVWAQSNNFP QVKPEEIQGI KDDFTTPGTL APTGLFLGGN KYMVIQGEPN AVIRGKKGAG GVTIKKTTLA
101: LVFGIYDEPM TPGQCNMVVE NLGEYLIESG L

Arabidopsis Description

PRO5Profilin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE63]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.