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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:
  • cytosol 1
  • plastid 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G040070.1 Barley cytosol 18.06 59.09
HORVU7Hr1G022570.1 Barley cytosol, plastid 47.22 37.78
CDY68825 Canola cytosol 24.31 26.72
CDY06819 Canola cytosol 24.31 26.72
Bra011099.1-P Field mustard cytosol 24.31 26.72
HORVU1Hr1G075570.2 Barley cytosol 23.61 25.95
CDY21648 Canola cytosol 23.61 25.95
CDX81944 Canola cytosol 23.61 25.95
AT4G29350.1 Thale cress cytosol 23.61 25.95
Bra031097.1-P Field mustard cytosol 23.61 25.95
AT5G56600.1 Thale cress cytosol 23.61 25.95
CDX88579 Canola cytosol 23.61 25.76
CDY11912 Canola cytosol 23.61 25.76
Bra039018.1-P Field mustard cytosol 22.92 25.19
CDY64971 Canola cytosol 22.92 25.19
CDY48724 Canola cytosol 22.92 25.19
HORVU3Hr1G019670.1 Barley cytosol 22.92 25.19
CDY35886 Canola cytosol 22.92 25.19
CDY32870 Canola cytosol 22.92 25.19
Bra002804.1-P Field mustard cytosol 22.92 25.19
CDY03344 Canola cytosol 22.92 25.19
AT2G19760.1 Thale cress cytosol 22.92 25.19
CDX82720 Canola cytosol 22.92 25.19
Bra036707.1-P Field mustard cytosol 22.92 25.19
Bra006865.1-P Field mustard cytosol 22.92 24.63
HORVU3Hr1G070490.1 Barley mitochondrion 25.69 22.16
Zm00001d036213_P002 Maize cytosol 23.61 21.12
HORVU3Hr1G070510.2 Barley cytosol 19.44 21.05
CDY40192 Canola cytosol, plastid 8.33 15.38
HORVU2Hr1G048590.3 Barley plastid 11.11 10.6
Bra014545.1-P Field mustard cytosol 10.42 7.32
HORVU2Hr1G073450.7 Barley extracellular 6.25 6.92
CDX99366 Canola cytosol, mitochondrion, vacuole 5.56 6.45
CDY13363 Canola peroxisome, plasma membrane, plastid 14.58 6.09
CDY03443 Canola cytosol 1.39 2.99
HORVU1Hr1G075600.2 Barley cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:HORVU5Hr1G053460.1EnsemblPlantsGene:HORVU5Hr1G053460Gene3D:3.30.450.30InterPro:PFNInterPro:PFN_sfPANTHER:PTHR11604
PANTHER:PTHR11604:SF7PFAM:PF00235PRINTS:PR01640SEG:segSUPFAM:SSF55770UniParc:UPI000B486315
UniProt:A0A287R931MapMan:20.2.2.3::::
Description
No Description!
Coordinates
chrchr5H:+:419635588..419636205
Molecular Weight (calculated)
16419.3 Da
IEP (calculated)
11.501
GRAVY (calculated)
-1.163
Length
144 amino acids
Sequence
(BLAST)
001: EKTSSGREYK VKDLPPTHAH PDPDPTPSQP AVKARHIQVQ ANHPQPRPRA LHTAVISRRR RRRRSGRRPR MSWQTYVDDH ICCEIDSQHL TSAVILGHDG
101: SVWAQSEAAR PPNPRRHRHQ PTSSRPGEHA PLARPYPNNT YVVV
Best Arabidopsis Sequence Match ( AT5G56600.1 )
(BLAST)
001: MSWQTYVDDH LMCDVAGNRL TAAAILGQDG SVWAQSNNFP QVKPEEIQGI KDDFTTPGTL APTGLFLGGN KYMVIQGEPN AVIRGKKGAG GVTIKKTTLA
101: LVFGIYDEPM TPGQCNMVVE NLGEYLIESG L
Arabidopsis Description
PRO5Profilin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE63]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.