Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03443 | Canola | cytosol | 18.55 | 95.52 |
| Bra002804.1-P | Field mustard | cytosol | 21.16 | 55.73 |
| CDY32870 | Canola | cytosol | 20.87 | 54.96 |
| CDY64971 | Canola | cytosol | 20.87 | 54.96 |
| CDY35886 | Canola | cytosol | 20.29 | 53.44 |
| HORVU1Hr1G075600.2 | Barley | cytosol | 6.96 | 53.33 |
| CDY11912 | Canola | cytosol | 20.29 | 53.03 |
| CDX82720 | Canola | cytosol | 20.0 | 52.67 |
| CDY03344 | Canola | cytosol | 19.71 | 51.91 |
| CDX81944 | Canola | cytosol | 19.71 | 51.91 |
| CDY48724 | Canola | cytosol | 19.71 | 51.91 |
| CDY21648 | Canola | cytosol | 19.71 | 51.91 |
| CDX88579 | Canola | cytosol | 19.71 | 51.52 |
| AT5G56600.1 | Thale cress | cytosol | 19.13 | 50.38 |
| CDY68825 | Canola | cytosol | 19.13 | 50.38 |
| CDY06819 | Canola | cytosol | 19.13 | 50.38 |
| OQU78328 | Sorghum | cytosol | 12.17 | 49.41 |
| HORVU1Hr1G075570.2 | Barley | cytosol | 17.97 | 47.33 |
| CDY35887 | Canola | cytosol | 18.26 | 47.01 |
| CDY48726 | Canola | cytosol | 15.65 | 46.96 |
| TraesCS1B01G356700.1 | Wheat | cytosol | 17.68 | 46.56 |
| TraesCS3B01G311200.1 | Wheat | cytosol | 17.68 | 46.56 |
| CDX81945 | Canola | cytosol | 17.97 | 46.27 |
| Os10t0323900-01 | Rice | cytosol, plasma membrane | 17.39 | 45.8 |
| EES01452 | Sorghum | cytosol | 17.39 | 45.8 |
| Os10t0323600-01 | Rice | cytosol | 17.39 | 45.8 |
| CDY30218 | Canola | cytosol | 17.68 | 45.52 |
| CDY47769 | Canola | cytosol | 17.68 | 45.52 |
| CDY48612 | Canola | cytosol | 17.68 | 45.52 |
| CDY03342 | Canola | cytosol | 17.68 | 45.52 |
| CDY06821 | Canola | cytosol | 17.68 | 45.52 |
| CDY62034 | Canola | cytosol | 17.39 | 44.78 |
| Zm00001d043523_P001 | Maize | cytosol | 17.1 | 44.7 |
| Zm00001d012773_P003 | Maize | cytosol | 17.1 | 44.7 |
| Zm00001d012772_P001 | Maize | cytosol | 16.81 | 44.27 |
| CDY14215 | Canola | cytosol | 17.1 | 44.03 |
| TraesCS3A01G277000.1 | Wheat | cytosol | 18.26 | 43.75 |
| EES19838 | Sorghum | cytosol | 16.52 | 43.51 |
| EER87860 | Sorghum | cytosol | 16.52 | 43.51 |
| TraesCS1A01G343400.1 | Wheat | cytosol | 17.68 | 42.36 |
| Zm00001d038783_P001 | Maize | cytosol | 15.94 | 41.98 |
| Os06t0152100-01 | Rice | extracellular | 15.94 | 41.98 |
| TraesCS7A01G107400.1 | Wheat | cytosol, golgi, plastid | 15.94 | 41.98 |
| Zm00001d010797_P001 | Maize | cytosol | 15.94 | 40.15 |
| TraesCS7D01G101800.1 | Wheat | cytosol | 16.23 | 38.89 |
| TraesCS3D01G277200.1 | Wheat | cytosol | 18.26 | 38.65 |
| HORVU3Hr1G070490.1 | Barley | mitochondrion | 17.1 | 35.33 |
| HORVU7Hr1G022570.1 | Barley | cytosol, plastid | 17.1 | 32.78 |
| CDX99366 | Canola | cytosol, mitochondrion, vacuole | 11.59 | 32.26 |
| CDX82721 | Canola | cytosol | 12.46 | 30.94 |
| CDY40192 | Canola | cytosol, plastid | 6.38 | 28.21 |
| HORVU7Hr1G040070.1 | Barley | cytosol | 3.48 | 27.27 |
| Zm00001d036213_P002 | Maize | cytosol | 12.46 | 26.71 |
| HORVU2Hr1G073450.7 | Barley | extracellular | 8.7 | 23.08 |
| HORVU3Hr1G070510.2 | Barley | cytosol | 6.96 | 18.05 |
| HORVU2Hr1G048590.3 | Barley | plastid | 6.96 | 15.89 |
| HORVU5Hr1G053460.1 | Barley | cytosol, nucleus, plastid | 6.09 | 14.58 |
Protein Annotations
| MapMan:20.2.2.3 | Gene3D:3.30.450.30 | GO:A0A078FM20 | UniProt:A0A078FM20 | EnsemblPlants:CDY13363 | ProteinID:CDY13363 |
| ProteinID:CDY13363.1 | InterPro:Choline_transptr-like | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00071386001 | PFAM:PF00235 | PFAM:PF04515 | InterPro:PFN | InterPro:PFN_sf | PRINTS:PR00392 |
| PRINTS:PR01640 | PANTHER:PTHR11604 | PANTHER:PTHR11604:SF7 | SMART:SM00392 | SUPFAM:SSF55770 | UniParc:UPI0004EB7C41 |
Description
BnaC06g13940DProfilin [Source:UniProtKB/TrEMBL;Acc:A0A078FM20]
Coordinates
chrLK032034:+:669188..672238
Molecular Weight (calculated)
38915.9 Da
IEP (calculated)
9.317
GRAVY (calculated)
-0.379
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPSDPVIRG NNFLWLHLCY RLTIFSNSQS ECSEAEEATC KSRSTKKMGI QRCRGRMMSS VRERSGKRRI ESLTSLAKRR DICLKSLKNG KGSSQLTLKE
101: VQDEGQEVRY EDGYMRGSDA RIEWERREDF CFCLFEGIMR GPKDVRCITT RGGREGPSGF NARRREGCVF LTLSPTLNEA ACYNLGSVAL GSLIIFFVES
201: VRFILEAIHR RTKLSGTTPD HWFSRMGHYT SRLSQKLQGV NINFAVQGVN NGFDVQGLKP KEISGINSYF SEPGTLSQMG CSSVAQKYMV IEGEPNAFIR
301: MKKGAGGVTI KKTTQALVFF MTTNDLDQCN IVVERFGDYL IDTWL
101: VQDEGQEVRY EDGYMRGSDA RIEWERREDF CFCLFEGIMR GPKDVRCITT RGGREGPSGF NARRREGCVF LTLSPTLNEA ACYNLGSVAL GSLIIFFVES
201: VRFILEAIHR RTKLSGTTPD HWFSRMGHYT SRLSQKLQGV NINFAVQGVN NGFDVQGLKP KEISGINSYF SEPGTLSQMG CSSVAQKYMV IEGEPNAFIR
301: MKKGAGGVTI KKTTQALVFF MTTNDLDQCN IVVERFGDYL IDTWL
001: MSWQSYVDDH LMCEVEGNHL THAAIFGQDG SVWAQSSAFP QLKPAEIAGI NKDFEEAGHL APTGLFLGGE KYMVVQGEAG AVIRGKKGPG GVTIKKTTQA
101: LVFGIYDEPM TGGQCNLVVE RLGDYLIESG L
101: LVFGIYDEPM TGGQCNLVVE RLGDYLIESG L
Arabidopsis Description
PRO2Profilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q42418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.