CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48612	Canola	cytosol	100.0	100.0
CDY47769	Canola	cytosol	100.0	100.0
CDY06821	Canola	cytosol	100.0	100.0
Bra024148.1-P	Field mustard	cytosol	99.25	99.25
AT4G29340.1	Thale cress	cytosol	96.27	96.27
CDY62034	Canola	cytosol	95.52	95.52
CDY14215	Canola	cytosol	94.78	94.78
CDX81945	Canola	cytosol	94.03	94.03
CDY03342	Canola	cytosol	93.28	93.28
CDY35887	Canola	cytosol	91.79	91.79
CDY48726	Canola	cytosol	73.13	85.22
VIT_11s0016g02940.t01	Wine grape	cytosol	82.84	83.46
KRH60195	Soybean	cytosol	82.84	83.46
KRH41476	Soybean	cytosol	82.84	83.46
KRH49003	Soybean	cytosol	80.6	81.2
Solyc12g044630.1.1	Tomato	cytosol	79.85	80.45
PGSC0003DMT400069000	Potato	cytosol	79.85	80.45
KRH74207	Soybean	cytosol	79.85	80.45
CDY32870	Canola	cytosol	78.36	80.15
CDY48724	Canola	cytosol	78.36	80.15
CDY03344	Canola	cytosol	78.36	80.15
CDX82720	Canola	cytosol	77.61	79.39
CDY21648	Canola	cytosol	77.61	79.39
PGSC0003DMT400042529	Potato	cytosol	77.61	79.39
CDX81944	Canola	cytosol	77.61	79.39
CDY64971	Canola	cytosol	77.61	79.39
CDY11912	Canola	cytosol	77.61	78.79
CDX88579	Canola	cytosol	77.61	78.79
GSMUA_Achr5P09300_001	Banana	cytosol	76.87	78.63
CDY35886	Canola	cytosol	76.87	78.63
Solyc06g066410.2.1	Tomato	cytosol, unclear	76.87	78.63
GSMUA_Achr1P11580_001	Banana	cytosol	76.12	77.86
GSMUA_Achr9P00090_001	Banana	cytosol	76.12	77.86
GSMUA_Achr4P01030_001	Banana	cytosol	75.37	77.1
CDY68825	Canola	cytosol	75.37	77.1
CDY06819	Canola	cytosol	75.37	77.1
GSMUA_Achr6P22530_001	Banana	cytosol	74.63	76.34
GSMUA_Achr1P04950_001	Banana	cytosol	74.63	76.34
PGSC0003DMT400088098	Potato	cytosol	69.4	70.45
CDX82721	Canola	cytosol	63.43	61.15
Solyc11g071210.1.1	Tomato	cytosol	14.18	59.38
CDY03443	Canola	cytosol	28.36	56.72
CDX99366	Canola	cytosol, mitochondrion, vacuole	38.06	41.13
CDY40192	Canola	cytosol, plastid	23.88	41.03
CDY13363	Canola	peroxisome, plasma membrane, plastid	45.52	17.68

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:A0A078H052	UniProt:A0A078H052	EnsemblPlants:CDY30218	ProteinID:CDY30218
ProteinID:CDY30218.1	ProteinID:CDY47769.1	ProteinID:CDY48612.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	EnsemblPlantsGene:GSBRNA2T00044830001
PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414
PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770	UniParc:UPI000254571A
SEG:seg	:	:	:	:	:

Description

BnaA03g49520DProfilin [Source:UniProtKB/TrEMBL;Acc:A0A078H052]

Coordinates

chrLK032250:-:349101..350153

Molecular Weight (calculated)

14429.2 Da

IEP (calculated)

4.840

GRAVY (calculated)

-0.133

Length

134 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKAQEF TGIMKDFDEP GHLAPTGLFL AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQDL

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.