Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G29350.1 | CDX70521 | AT5G13810.1 | 21798944 |
| AT4G29350.1 | CDX78539 | AT5G13810.1 | 21798944 |
| AT4G29350.1 | CDY67732 | AT5G13810.1 | 21798944 |
| AT4G29350.1 | CDY70634 | AT5G13810.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011099.1-P | Field mustard | cytosol | 99.24 | 99.24 |
| CDY06819 | Canola | cytosol | 99.24 | 99.24 |
| AT4G29350.1 | Thale cress | cytosol | 91.6 | 91.6 |
| CDY03344 | Canola | cytosol | 89.31 | 89.31 |
| CDY48724 | Canola | cytosol | 89.31 | 89.31 |
| CDX82720 | Canola | cytosol | 89.31 | 89.31 |
| CDX81944 | Canola | cytosol | 88.55 | 88.55 |
| CDY21648 | Canola | cytosol | 88.55 | 88.55 |
| CDY35886 | Canola | cytosol | 88.55 | 88.55 |
| CDY32870 | Canola | cytosol | 83.97 | 83.97 |
| CDY64971 | Canola | cytosol | 83.21 | 83.21 |
| CDY11912 | Canola | cytosol | 78.63 | 78.03 |
| CDX88579 | Canola | cytosol | 77.86 | 77.27 |
| TraesCS7A01G107400.1 | Wheat | cytosol, golgi, plastid | 77.1 | 77.1 |
| EES01452 | Sorghum | cytosol | 75.57 | 75.57 |
| CDY30218 | Canola | cytosol | 77.1 | 75.37 |
| CDY48612 | Canola | cytosol | 77.1 | 75.37 |
| CDY47769 | Canola | cytosol | 77.1 | 75.37 |
| CDY35887 | Canola | cytosol | 77.1 | 75.37 |
| CDY06821 | Canola | cytosol | 77.1 | 75.37 |
| CDY03342 | Canola | cytosol | 77.1 | 75.37 |
| CDX81945 | Canola | cytosol | 77.1 | 75.37 |
| Zm00001d012772_P001 | Maize | cytosol | 74.81 | 74.81 |
| Os10t0323900-01 | Rice | cytosol, plasma membrane | 74.81 | 74.81 |
| Os10t0323600-01 | Rice | cytosol | 74.81 | 74.81 |
| CDY62034 | Canola | cytosol | 76.34 | 74.63 |
| OQU78328 | Sorghum | cytosol | 48.09 | 74.12 |
| TraesCS3B01G311200.1 | Wheat | cytosol | 74.05 | 74.05 |
| TraesCS1B01G356700.1 | Wheat | cytosol | 74.05 | 74.05 |
| HORVU1Hr1G075570.2 | Barley | cytosol | 74.05 | 74.05 |
| Os06t0152100-01 | Rice | extracellular | 74.05 | 74.05 |
| CDY14215 | Canola | cytosol | 75.57 | 73.88 |
| Zm00001d043523_P001 | Maize | cytosol | 74.05 | 73.48 |
| Zm00001d012773_P003 | Maize | cytosol | 74.05 | 73.48 |
| HORVU1Hr1G075600.2 | Barley | cytosol | 25.19 | 73.33 |
| EER87860 | Sorghum | cytosol | 73.28 | 73.28 |
| Zm00001d038783_P001 | Maize | cytosol | 72.52 | 72.52 |
| EES19838 | Sorghum | cytosol | 72.52 | 72.52 |
| TraesCS7D01G101800.1 | Wheat | cytosol | 78.63 | 71.53 |
| CDY48726 | Canola | cytosol | 60.31 | 68.7 |
| Zm00001d010797_P001 | Maize | cytosol | 70.99 | 67.88 |
| TraesCS3A01G277000.1 | Wheat | cytosol | 74.05 | 67.36 |
| TraesCS1A01G343400.1 | Wheat | cytosol | 74.05 | 67.36 |
| HORVU7Hr1G040070.1 | Barley | cytosol | 20.61 | 61.36 |
| TraesCS3D01G277200.1 | Wheat | cytosol | 74.05 | 59.51 |
| HORVU3Hr1G070490.1 | Barley | mitochondrion | 73.28 | 57.48 |
| CDY03443 | Canola | cytosol | 29.01 | 56.72 |
| HORVU7Hr1G022570.1 | Barley | cytosol, plastid | 77.86 | 56.67 |
| CDX82721 | Canola | cytosol | 54.96 | 51.8 |
| CDY40192 | Canola | cytosol, plastid | 29.01 | 48.72 |
| Zm00001d036213_P002 | Maize | cytosol | 55.73 | 45.34 |
| CDX99366 | Canola | cytosol, mitochondrion, vacuole | 40.46 | 42.74 |
| HORVU2Hr1G073450.7 | Barley | extracellular | 34.35 | 34.62 |
| HORVU3Hr1G070510.2 | Barley | cytosol | 32.82 | 32.33 |
| HORVU2Hr1G048590.3 | Barley | plastid | 30.53 | 26.49 |
| HORVU5Hr1G053460.1 | Barley | cytosol, nucleus, plastid | 26.72 | 24.31 |
| CDY13363 | Canola | peroxisome, plasma membrane, plastid | 50.38 | 19.13 |
Protein Annotations
| MapMan:20.2.2.3 | Gene3D:3.30.450.30 | GO:A0A078JQX9 | UniProt:A0A078JQX9 | EnsemblPlants:CDY68825 | ProteinID:CDY68825 |
| ProteinID:CDY68825.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | EnsemblPlantsGene:GSBRNA2T00080383001 | PFAM:PF00235 | InterPro:PFN |
| InterPro:PFN_sf | PRINTS:PR00392 | PRINTS:PR01640 | ScanProsite:PS00414 | PANTHER:PTHR11604 | PANTHER:PTHR11604:SF7 |
| InterPro:Profilin_CS | SMART:SM00392 | SUPFAM:SSF55770 | UniParc:UPI0004EF4693 | : | : |
Description
BnaA01g34880DProfilin [Source:UniProtKB/TrEMBL;Acc:A0A078JQX9]
Coordinates
chrLK038082:+:386..1547
Molecular Weight (calculated)
14160.8 Da
IEP (calculated)
4.443
GRAVY (calculated)
-0.212
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQSYVDDH LMCDVEGNHL TSAAILGQDG SVWAQSTNFP QLKPAEIEGI KKDFEEPGHL APTGLFLGGE KYMVVQGEAG AVIRGKKGPG GVTIKKTNQA
101: FVFGIYDEPM TGGQCNLVVE RLGDYLIESD L
101: FVFGIYDEPM TGGQCNLVVE RLGDYLIESD L
001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
Arabidopsis Description
PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.