CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G075600.2	Barley	cytosol	47.06	88.89
EES19838	Sorghum	cytosol	100.0	64.89
EES01452	Sorghum	cytosol	95.29	61.83
Zm00001d038783_P001	Maize	cytosol	91.76	59.54
Zm00001d010797_P001	Maize	cytosol	94.12	58.39
EER87860	Sorghum	cytosol	87.06	56.49
HORVU1Hr1G075570.2	Barley	cytosol	85.88	55.73
TraesCS1B01G356700.1	Wheat	cytosol	84.71	54.96
CDY03443	Canola	cytosol	42.35	53.73
TraesCS1A01G343400.1	Wheat	cytosol	84.71	50.0
CDY32870	Canola	cytosol	76.47	49.62
CDY21648	Canola	cytosol	76.47	49.62
CDY48724	Canola	cytosol	76.47	49.62
CDY03344	Canola	cytosol	76.47	49.62
CDX81944	Canola	cytosol	76.47	49.62
Bra036707.1-P	Field mustard	cytosol	76.47	49.62
Bra031097.1-P	Field mustard	cytosol	76.47	49.62
Bra002804.1-P	Field mustard	cytosol	76.47	49.62
CDY64971	Canola	cytosol	75.29	48.85
CDY35886	Canola	cytosol	75.29	48.85
AT4G29350.1	Thale cress	cytosol	75.29	48.85
CDX82720	Canola	cytosol	75.29	48.85
Bra039018.1-P	Field mustard	cytosol	75.29	48.85
CDY06819	Canola	cytosol	74.12	48.09
CDY68825	Canola	cytosol	74.12	48.09
Bra011099.1-P	Field mustard	cytosol	74.12	48.09
AT2G19760.1	Thale cress	cytosol	74.12	48.09
CDY11912	Canola	cytosol	74.12	47.73
AT5G56600.1	Thale cress	cytosol	72.94	47.33
CDX88579	Canola	cytosol	72.94	46.97
Bra006865.1-P	Field mustard	cytosol	72.94	46.27
CDX99366	Canola	cytosol, mitochondrion, vacuole	55.29	37.9
CDY40192	Canola	cytosol, plastid	34.12	37.18
KXG31648	Sorghum	plastid	56.47	25.95
Bra014545.1-P	Field mustard	cytosol	55.29	22.93
CDY13363	Canola	peroxisome, plasma membrane, plastid	49.41	12.17

Protein Annotations

EnsemblPlants:OQU78328	EnsemblPlantsGene:SORBI_3009G203766	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	InterPro:PFN	InterPro:PFN_sf	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	PFAM:PF00235
PRINTS:PR00392	PRINTS:PR01640	ProteinID:OQU78328	ProteinID:OQU78328.1	SMART:SM00392	SUPFAM:SSF55770
UniParc:UPI000B426C32	UniProt:A0A1Z5R3G7	MapMan:20.2.2.3	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:55256866..55257215

Molecular Weight (calculated)

9086.2 Da

IEP (calculated)

5.776

GRAVY (calculated)

-0.052

Length

85 amino acids

Sequence
(BLAST)

1: MTNIMKDFDE PGHLAPTGLF LGATKYMVIQ GEPGAVIRGK KGSGGITVKK TGQALIIGIY DEPMTPGQCN MVVERLGDYL VEQGM

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.