Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031097.1-P | Field mustard | cytosol | 90.84 | 90.84 |
| Bra036707.1-P | Field mustard | cytosol | 90.84 | 90.84 |
| Bra039018.1-P | Field mustard | cytosol | 90.84 | 90.84 |
| CDX81944 | Canola | cytosol | 90.84 | 90.84 |
| CDX82720 | Canola | cytosol | 90.84 | 90.84 |
| CDY03344 | Canola | cytosol | 90.84 | 90.84 |
| CDY21648 | Canola | cytosol | 90.84 | 90.84 |
| CDY35886 | Canola | cytosol | 90.84 | 90.84 |
| CDY48724 | Canola | cytosol | 90.84 | 90.84 |
| AT4G29350.1 | Thale cress | cytosol | 88.55 | 88.55 |
| AT5G56600.1 | Thale cress | cytosol | 81.68 | 81.68 |
| Os10t0323600-01 | Rice | cytosol | 76.34 | 76.34 |
| Os10t0323900-01 | Rice | cytosol, plasma membrane | 76.34 | 76.34 |
| EES01452 | Sorghum | cytosol | 75.57 | 75.57 |
| TraesCS7A01G107400.1 | Wheat | cytosol, golgi, plastid | 75.57 | 75.57 |
| AT2G19770.1 | Thale cress | cytosol | 77.1 | 75.37 |
| Zm00001d043523_P001 | Maize | cytosol | 75.57 | 75.0 |
| HORVU1Hr1G075570.2 | Barley | cytosol | 74.81 | 74.81 |
| TraesCS3B01G311200.1 | Wheat | cytosol | 74.81 | 74.81 |
| Os06t0152100-01 | Rice | extracellular | 74.81 | 74.81 |
| OQU78328 | Sorghum | cytosol | 48.09 | 74.12 |
| Zm00001d012772_P001 | Maize | cytosol | 74.05 | 74.05 |
| TraesCS1B01G356700.1 | Wheat | cytosol | 74.05 | 74.05 |
| EER87860 | Sorghum | cytosol | 74.05 | 74.05 |
| AT4G29340.1 | Thale cress | cytosol | 75.57 | 73.88 |
| Zm00001d012773_P003 | Maize | cytosol | 74.05 | 73.48 |
| HORVU1Hr1G075600.2 | Barley | cytosol | 25.19 | 73.33 |
| EES19838 | Sorghum | cytosol | 72.52 | 72.52 |
| Zm00001d038783_P001 | Maize | cytosol | 70.99 | 70.99 |
| TraesCS7D01G101800.1 | Wheat | cytosol | 77.1 | 70.14 |
| Zm00001d010797_P001 | Maize | cytosol | 70.99 | 67.88 |
| TraesCS1A01G343400.1 | Wheat | cytosol | 74.05 | 67.36 |
| TraesCS3A01G277000.1 | Wheat | cytosol | 74.05 | 67.36 |
| HORVU7Hr1G040070.1 | Barley | cytosol | 21.37 | 63.64 |
| TraesCS3D01G277200.1 | Wheat | cytosol | 74.81 | 60.12 |
| HORVU3Hr1G070490.1 | Barley | mitochondrion | 74.05 | 58.08 |
| HORVU7Hr1G022570.1 | Barley | cytosol, plastid | 76.34 | 55.56 |
| Zm00001d036213_P002 | Maize | cytosol | 57.25 | 46.58 |
| HORVU2Hr1G073450.7 | Barley | extracellular | 34.35 | 34.62 |
| HORVU3Hr1G070510.2 | Barley | cytosol | 32.82 | 32.33 |
| HORVU2Hr1G048590.3 | Barley | plastid | 30.53 | 26.49 |
| HORVU5Hr1G053460.1 | Barley | cytosol, nucleus, plastid | 25.19 | 22.92 |
Protein Annotations
| PDB:1A0K | PDB:1PLM | MapMan:20.2.2.3 | Gene3D:3.30.450.30 | PDB:3NUL | EntrezGene:816495 |
| ProteinID:AAB39476.1 | ProteinID:AAC62140.1 | ProteinID:AAG10090.1 | ProteinID:AEC06923.1 | ArrayExpress:AT2G19760 | EnsemblPlantsGene:AT2G19760 |
| RefSeq:AT2G19760 | TAIR:AT2G19760 | RefSeq:AT2G19760-TAIR-G | EnsemblPlants:AT2G19760.1 | TAIR:AT2G19760.1 | EMBL:AY072427 |
| EMBL:BT000264 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0003785 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005819 | GO:GO:0005829 | GO:GO:0005856 |
| GO:GO:0005886 | GO:GO:0005938 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008154 | GO:GO:0009506 |
| GO:GO:0009524 | GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009826 | GO:GO:0009987 | GO:GO:0010229 |
| GO:GO:0015629 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030312 | GO:GO:0040007 |
| GO:GO:0042989 | GO:GO:0048046 | GO:GO:0048366 | GO:GO:0048527 | RefSeq:NP_179566.1 | PFAM:PF00235 |
| InterPro:PFN | Symbol:PFN1 | InterPro:PFN_sf | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000025 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009062 | PO:PO:0009066 | PO:PO:0020003 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00392 | PRINTS:PR01640 | ScanProsite:PS00414 | PANTHER:PTHR11604 | PANTHER:PTHR11604:SF7 |
| InterPro:Profilin_CS | UniProt:Q42449 | SMART:SM00392 | SUPFAM:SSF55770 | EMBL:U43325 | EMBL:U43590 |
| UniParc:UPI0000000FE7 | : | : | : | : | : |
Description
PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
Coordinates
chr2:-:8516658..8518194
Molecular Weight (calculated)
14267.1 Da
IEP (calculated)
4.444
GRAVY (calculated)
-0.215
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.