Factsheet for Bra031097.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81944	Canola	cytosol	100.0	100.0
CDY21648	Canola	cytosol	100.0	100.0
Bra036707.1-P	Field mustard	cytosol	99.24	99.24
Bra039018.1-P	Field mustard	cytosol	96.95	96.95
AT2G19760.1	Thale cress	cytosol	90.84	90.84
Bra011099.1-P	Field mustard	cytosol	88.55	88.55
Bra002804.1-P	Field mustard	cytosol	87.02	87.02
Bra006865.1-P	Field mustard	cytosol	81.68	79.85
Os10t0323900-01	Rice	cytosol, plasma membrane	77.86	77.86
Os10t0323600-01	Rice	cytosol	77.86	77.86
EES01452	Sorghum	cytosol	77.86	77.86
Bra011098.1-P	Field mustard	cytosol	79.39	77.61
Bra024148.1-P	Field mustard	cytosol	79.39	77.61
Zm00001d012772_P001	Maize	cytosol	77.1	77.1
Zm00001d043523_P001	Maize	cytosol	77.1	76.52
OQU78328	Sorghum	cytosol	49.62	76.47
EER87860	Sorghum	cytosol	76.34	76.34
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	76.34	76.34
TraesCS3B01G311200.1	Wheat	cytosol	76.34	76.34
Bra010331.1-P	Field mustard	cytosol	77.86	76.12
Zm00001d012773_P003	Maize	cytosol	76.34	75.76
HORVU1Hr1G075570.2	Barley	cytosol	75.57	75.57
TraesCS1B01G356700.1	Wheat	cytosol	75.57	75.57
Os06t0152100-01	Rice	extracellular	75.57	75.57
Bra039019.1-P	Field mustard	cytosol	76.34	74.63
Bra031101.1-P	Field mustard	cytosol	76.34	74.63
EES19838	Sorghum	cytosol	74.05	74.05
Zm00001d038783_P001	Maize	cytosol	74.05	74.05
Bra036705.1-P	Field mustard	cytosol	75.57	73.88
HORVU1Hr1G075600.2	Barley	cytosol	25.19	73.33
TraesCS7D01G101800.1	Wheat	cytosol	77.86	70.83
Zm00001d010797_P001	Maize	cytosol	74.05	70.8
TraesCS1A01G343400.1	Wheat	cytosol	75.57	68.75
TraesCS3A01G277000.1	Wheat	cytosol	74.81	68.06
HORVU7Hr1G040070.1	Barley	cytosol	20.61	61.36
TraesCS3D01G277200.1	Wheat	cytosol	76.34	61.35
HORVU3Hr1G070490.1	Barley	mitochondrion	76.34	59.88
HORVU7Hr1G022570.1	Barley	cytosol, plastid	77.1	56.11
Zm00001d036213_P002	Maize	cytosol	57.25	46.58
HORVU2Hr1G073450.7	Barley	extracellular	35.11	35.38
HORVU3Hr1G070510.2	Barley	cytosol	33.59	33.08
Bra014545.1-P	Field mustard	cytosol	44.27	28.29
HORVU2Hr1G048590.3	Barley	plastid	31.3	27.15
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	25.95	23.61

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EnsemblPlantsGene:Bra031097	EnsemblPlants:Bra031097.1	EnsemblPlants:Bra031097.1-P	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	UniProt:M4EQM6	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI00025429D1	:	:	:	:

Description

AT2G19760 (E=2e-066) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding

Coordinates

chrA09:+:32500429..32501051

Molecular Weight (calculated)

14016.8 Da

IEP (calculated)

4.302

GRAVY (calculated)

-0.037

Length

131 amino acids

Sequence
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAAFP QLKTEEINGI TKDFEEPGFL APTGLFLGGA KYMVIQGEPG AVIRGKKGPG GVTIKKTTQA
101: LVIGIYEEPM TGGQCNLVVE RLGDYLIESD L

Best Arabidopsis Sequence Match ( AT2G19760.1 )
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L

Arabidopsis Description

PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.