Factsheet for TraesCS1B01G356700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G075570.2	Barley	cytosol	93.89	93.89
HORVU1Hr1G075600.2	Barley	cytosol	32.06	93.33
TraesCS1A01G343400.1	Wheat	cytosol	100.0	90.97
TraesCS3B01G311200.1	Wheat	cytosol	88.55	88.55
OQU78328	Sorghum	cytosol	54.96	84.71
EES19838	Sorghum	cytosol	83.21	83.21
Zm00001d038783_P001	Maize	cytosol	79.39	79.39
Bra002804.1-P	Field mustard	cytosol	77.1	77.1
CDY32870	Canola	cytosol	77.1	77.1
Zm00001d010797_P001	Maize	cytosol	80.15	76.64
CDY64971	Canola	cytosol	76.34	76.34
CDY35886	Canola	cytosol	76.34	76.34
CDY11912	Canola	cytosol	76.34	75.76
CDY03344	Canola	cytosol	75.57	75.57
Bra031097.1-P	Field mustard	cytosol	75.57	75.57
Bra036707.1-P	Field mustard	cytosol	75.57	75.57
Bra039018.1-P	Field mustard	cytosol	75.57	75.57
CDX81944	Canola	cytosol	75.57	75.57
CDY48724	Canola	cytosol	75.57	75.57
CDX82720	Canola	cytosol	75.57	75.57
CDY21648	Canola	cytosol	75.57	75.57
TraesCS3B01G127200.1	Wheat	cytosol	74.81	74.81
AT2G19760.1	Thale cress	cytosol	74.05	74.05
CDY68825	Canola	cytosol	74.05	74.05
CDY06819	Canola	cytosol	74.05	74.05
Bra011099.1-P	Field mustard	cytosol	74.05	74.05
CDX88579	Canola	cytosol	74.05	73.48
Bra006865.1-P	Field mustard	cytosol	74.81	73.13
AT4G29350.1	Thale cress	cytosol	72.52	72.52
AT5G56600.1	Thale cress	cytosol	71.76	71.76
CDY03443	Canola	cytosol	29.01	56.72
CDY40192	Canola	cytosol, plastid	25.19	42.31
CDX99366	Canola	cytosol, mitochondrion, vacuole	38.93	41.13
Bra014545.1-P	Field mustard	cytosol	45.04	28.78
CDY13363	Canola	peroxisome, plasma membrane, plastid	46.56	17.68

Protein Annotations

EnsemblPlants:TraesCS1B01G356700.1	EnsemblPlantsGene:TraesCS1B01G356700	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	InterPro:PFN	InterPro:PFN_sf	InterPro:Profilin_CS	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7
PFAM:PF00235	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	SEG:seg	SMART:SM00392
SUPFAM:SSF55770	TIGR:cd00148	MapMan:20.2.2.3	:	:	:

Description

No Description!

Coordinates

chr1B:-:585679810..585680428

Molecular Weight (calculated)

14007.9 Da

IEP (calculated)

4.658

GRAVY (calculated)

-0.013

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDIEGHHL ASAAILGHDG TVWAQSADFP QFAPAEITAI MKDFDEPGHL APTGMFVAGA KYMVIQGEPG AVIRGKKGAG GITIKKTGQA
101: LVVGAYEEPM TPGQCNMVVE RLGDYLVEQG M

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.