Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11912 | Canola | cytosol | 96.21 | 96.21 |
| Bra006865.1-P | Field mustard | cytosol | 96.97 | 95.52 |
| CDY32870 | Canola | cytosol | 89.39 | 90.08 |
| CDY64971 | Canola | cytosol | 88.64 | 89.31 |
| AT5G56600.1 | Thale cress | cytosol | 83.33 | 83.97 |
| CDY03344 | Canola | cytosol | 82.58 | 83.21 |
| CDY48724 | Canola | cytosol | 82.58 | 83.21 |
| CDX81944 | Canola | cytosol | 81.82 | 82.44 |
| CDX82720 | Canola | cytosol | 81.82 | 82.44 |
| CDY21648 | Canola | cytosol | 81.82 | 82.44 |
| CDY35886 | Canola | cytosol | 81.06 | 81.68 |
| CDY68825 | Canola | cytosol | 77.27 | 77.86 |
| CDY06819 | Canola | cytosol | 77.27 | 77.86 |
| HORVU1Hr1G075600.2 | Barley | cytosol | 26.52 | 77.78 |
| CDY48612 | Canola | cytosol | 78.79 | 77.61 |
| CDY47769 | Canola | cytosol | 78.79 | 77.61 |
| CDY30218 | Canola | cytosol | 78.79 | 77.61 |
| CDY06821 | Canola | cytosol | 78.79 | 77.61 |
| CDY62034 | Canola | cytosol | 78.03 | 76.87 |
| CDY35887 | Canola | cytosol | 78.03 | 76.87 |
| CDX81945 | Canola | cytosol | 78.03 | 76.87 |
| CDY14215 | Canola | cytosol | 77.27 | 76.12 |
| EER87860 | Sorghum | cytosol | 75.0 | 75.57 |
| CDY03342 | Canola | cytosol | 76.52 | 75.37 |
| HORVU1Hr1G075570.2 | Barley | cytosol | 74.24 | 74.81 |
| TraesCS1B01G356700.1 | Wheat | cytosol | 73.48 | 74.05 |
| TraesCS7A01G107400.1 | Wheat | cytosol, golgi, plastid | 72.73 | 73.28 |
| Os10t0323900-01 | Rice | cytosol, plasma membrane | 72.73 | 73.28 |
| EES01452 | Sorghum | cytosol | 72.73 | 73.28 |
| Os10t0323600-01 | Rice | cytosol | 72.73 | 73.28 |
| Os06t0152100-01 | Rice | extracellular | 72.73 | 73.28 |
| OQU78328 | Sorghum | cytosol | 46.97 | 72.94 |
| TraesCS3B01G311200.1 | Wheat | cytosol | 71.97 | 72.52 |
| CDY48726 | Canola | cytosol | 62.88 | 72.17 |
| Zm00001d043523_P001 | Maize | cytosol | 71.97 | 71.97 |
| Zm00001d012772_P001 | Maize | cytosol | 71.21 | 71.76 |
| Zm00001d012773_P003 | Maize | cytosol | 70.45 | 70.45 |
| EES19838 | Sorghum | cytosol | 69.7 | 70.23 |
| TraesCS7D01G101800.1 | Wheat | cytosol | 74.24 | 68.06 |
| Zm00001d038783_P001 | Maize | cytosol | 67.42 | 67.94 |
| TraesCS1A01G343400.1 | Wheat | cytosol | 73.48 | 67.36 |
| Zm00001d010797_P001 | Maize | cytosol | 68.18 | 65.69 |
| CDY03443 | Canola | cytosol | 33.33 | 65.67 |
| TraesCS3A01G277000.1 | Wheat | cytosol | 71.21 | 65.28 |
| HORVU7Hr1G040070.1 | Barley | cytosol | 21.21 | 63.64 |
| TraesCS3D01G277200.1 | Wheat | cytosol | 71.97 | 58.28 |
| HORVU3Hr1G070490.1 | Barley | mitochondrion | 71.97 | 56.89 |
| CDX82721 | Canola | cytosol | 57.58 | 54.68 |
| HORVU7Hr1G022570.1 | Barley | cytosol, plastid | 74.24 | 54.44 |
| CDX99366 | Canola | cytosol, mitochondrion, vacuole | 43.94 | 46.77 |
| Zm00001d036213_P002 | Maize | cytosol | 53.79 | 44.1 |
| CDY40192 | Canola | cytosol, plastid | 22.73 | 38.46 |
| HORVU2Hr1G073450.7 | Barley | extracellular | 33.33 | 33.85 |
| HORVU3Hr1G070510.2 | Barley | cytosol | 30.3 | 30.08 |
| HORVU2Hr1G048590.3 | Barley | plastid | 29.55 | 25.83 |
| HORVU5Hr1G053460.1 | Barley | cytosol, nucleus, plastid | 25.76 | 23.61 |
| CDY13363 | Canola | peroxisome, plasma membrane, plastid | 51.52 | 19.71 |
Protein Annotations
| MapMan:20.2.2.3 | Gene3D:3.30.450.30 | GO:A0A078DJ50 | EnsemblPlants:CDX88579 | ProteinID:CDX88579 | ProteinID:CDX88579.1 |
| GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00148612001 | PFAM:PF00235 |
| InterPro:PFN | InterPro:PFN_sf | PRINTS:PR00392 | PRINTS:PR01640 | ScanProsite:PS00414 | PANTHER:PTHR11604 |
| PANTHER:PTHR11604:SF7 | InterPro:Profilin_CS | SMART:SM00392 | SUPFAM:SSF55770 | UniParc:UPI0004EF103B | : |
Description
BnaA03g10700D
Coordinates
chrLK031856:-:17929..18962
Molecular Weight (calculated)
14252.0 Da
IEP (calculated)
4.291
GRAVY (calculated)
-0.149
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQTYVDDH LMCDLGDEQR LTAAAIIGQD GSVWAQSANF PQLKSEEIEG INKDFTEPGT LAPTGLFING AKYMVIQGEP NAVIRGKKGA GGVTIKKTTQ
101: ALVFGIYEDP VTPGQCNMVV ERLGDYLIES GL
101: ALVFGIYEDP VTPGQCNMVV ERLGDYLIES GL
001: MSWQTYVDDH LMCDVAGNRL TAAAILGQDG SVWAQSNNFP QVKPEEIQGI KDDFTTPGTL APTGLFLGGN KYMVIQGEPN AVIRGKKGAG GVTIKKTTLA
101: LVFGIYDEPM TPGQCNMVVE NLGEYLIESG L
101: LVFGIYDEPM TPGQCNMVVE NLGEYLIESG L
Arabidopsis Description
PRO5Profilin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE63]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.