Factsheet for TraesCS1A01G343400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G356700.1	Wheat	cytosol	90.97	100.0
HORVU1Hr1G075570.2	Barley	cytosol	85.42	93.89
HORVU1Hr1G075600.2	Barley	cytosol	29.17	93.33
OQU78328	Sorghum	cytosol	50.0	84.71
EES19838	Sorghum	cytosol	75.69	83.21
TraesCS3A01G277000.1	Wheat	cytosol	81.94	81.94
Zm00001d038783_P001	Maize	cytosol	72.22	79.39
Bra002804.1-P	Field mustard	cytosol	70.14	77.1
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	70.14	77.1
CDY32870	Canola	cytosol	70.14	77.1
Zm00001d010797_P001	Maize	cytosol	72.92	76.64
CDY64971	Canola	cytosol	69.44	76.34
CDY35886	Canola	cytosol	69.44	76.34
CDY11912	Canola	cytosol	69.44	75.76
Bra031097.1-P	Field mustard	cytosol	68.75	75.57
CDY48724	Canola	cytosol	68.75	75.57
CDY21648	Canola	cytosol	68.75	75.57
TraesCS3A01G108200.1	Wheat	cytosol	68.75	75.57
CDY03344	Canola	cytosol	68.75	75.57
CDX82720	Canola	cytosol	68.75	75.57
CDX81944	Canola	cytosol	68.75	75.57
Bra039018.1-P	Field mustard	cytosol	68.75	75.57
Bra036707.1-P	Field mustard	cytosol	68.75	75.57
CDY06819	Canola	cytosol	67.36	74.05
Bra011099.1-P	Field mustard	cytosol	67.36	74.05
CDY68825	Canola	cytosol	67.36	74.05
AT2G19760.1	Thale cress	cytosol	67.36	74.05
CDX88579	Canola	cytosol	67.36	73.48
Bra006865.1-P	Field mustard	cytosol	68.06	73.13
AT4G29350.1	Thale cress	cytosol	65.97	72.52
AT5G56600.1	Thale cress	cytosol	65.28	71.76
CDY03443	Canola	cytosol	26.39	56.72
CDY40192	Canola	cytosol, plastid	22.92	42.31
CDX99366	Canola	cytosol, mitochondrion, vacuole	35.42	41.13
Bra014545.1-P	Field mustard	cytosol	40.97	28.78
CDY13363	Canola	peroxisome, plasma membrane, plastid	42.36	17.68

Protein Annotations

EnsemblPlants:TraesCS1A01G343400.1	EnsemblPlantsGene:TraesCS1A01G343400	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	InterPro:PFN	InterPro:PFN_sf	InterPro:Profilin_CS	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7
PFAM:PF00235	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	SEG:seg	SMART:SM00392
SUPFAM:SSF55770	TIGR:cd00148	MapMan:20.2.2.3	:	:	:

Description

No Description!

Coordinates

chr1A:-:531986100..531986741

Molecular Weight (calculated)

15516.7 Da

IEP (calculated)

4.557

GRAVY (calculated)

0.008

Length

144 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDIEGHHL ASAAILGHDG TVWAQSADFP QVTADFLYDL SRVQFAPAEI TAIMKDFDEP GHLAPTGMFV AGAKYMVIQG EPGAVIRGKK
101: GAGGITIKKT GQALVVGAYE EPMTPGQCNM VVERLGDYLV EQGM

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.