Factsheet for TraesCS7A01G107400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plastid
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22160430
golgi: 23128297

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G101800.1	Wheat	cytosol	97.71	88.89
EER87860	Sorghum	cytosol	84.73	84.73
Os06t0152100-01	Rice	extracellular	84.73	84.73
TraesCS3A01G108200.1	Wheat	cytosol	77.86	77.86
CDX82720	Canola	cytosol	77.1	77.1
CDY48724	Canola	cytosol	77.1	77.1
CDY06819	Canola	cytosol	77.1	77.1
CDY68825	Canola	cytosol	77.1	77.1
CDY03344	Canola	cytosol	77.1	77.1
Bra039018.1-P	Field mustard	cytosol	77.1	77.1
Bra036707.1-P	Field mustard	cytosol	77.1	77.1
Bra011099.1-P	Field mustard	cytosol	77.1	77.1
AT4G29350.1	Thale cress	cytosol	77.1	77.1
CDX81944	Canola	cytosol	76.34	76.34
Bra031097.1-P	Field mustard	cytosol	76.34	76.34
Bra002804.1-P	Field mustard	cytosol	76.34	76.34
CDY64971	Canola	cytosol	76.34	76.34
CDY21648	Canola	cytosol	76.34	76.34
CDY32870	Canola	cytosol	76.34	76.34
CDY35886	Canola	cytosol	76.34	76.34
AT2G19760.1	Thale cress	cytosol	75.57	75.57
AT5G56600.1	Thale cress	cytosol	74.81	74.81
CDY11912	Canola	cytosol	74.05	73.48
CDX88579	Canola	cytosol	73.28	72.73
TraesCS3A01G277000.1	Wheat	cytosol	78.63	71.53
Bra006865.1-P	Field mustard	cytosol	72.52	70.9
TraesCS1A01G343400.1	Wheat	cytosol	77.1	70.14
CDY03443	Canola	cytosol	25.95	50.75
Zm00001d036213_P002	Maize	cytosol	59.54	48.45
CDX99366	Canola	cytosol, mitochondrion, vacuole	43.51	45.97
CDY40192	Canola	cytosol, plastid	25.95	43.59
HORVU2Hr1G073450.7	Barley	extracellular	38.93	39.23
HORVU2Hr1G048590.3	Barley	plastid	37.4	32.45
Bra014545.1-P	Field mustard	cytosol	46.56	29.76
CDY13363	Canola	peroxisome, plasma membrane, plastid	41.98	15.94

Protein Annotations

EnsemblPlants:TraesCS7A01G107400.1	EnsemblPlantsGene:TraesCS7A01G107400	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	InterPro:PFN	InterPro:PFN_sf	InterPro:Profilin_CS	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7
PFAM:PF00235	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	SEG:seg	SMART:SM00392
SUPFAM:SSF55770	TIGR:cd00148	MapMan:20.2.2.3	:	:	:

Description

No Description!

Coordinates

chr7A:+:65006014..65007765

Molecular Weight (calculated)

14179.1 Da

IEP (calculated)

4.696

GRAVY (calculated)

-0.066

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LCCEIDGQHL TSAAILGHDG SVWAESPNFP KFKPEEIAGI VKDFEEPGHL APTGLFLGGT KYMVIQGEPG VVIRGKKGTG GITIKKTGMA
101: LILGIYDEPM TPGQCNLVVE RLGDYLVEQG F

Best Arabidopsis Sequence Match ( AT4G29350.1 )
(BLAST)

001: MSWQSYVDDH LMCEVEGNHL THAAIFGQDG SVWAQSSAFP QLKPAEIAGI NKDFEEAGHL APTGLFLGGE KYMVVQGEAG AVIRGKKGPG GVTIKKTTQA
101: LVFGIYDEPM TGGQCNLVVE RLGDYLIESG L

Arabidopsis Description

PRO2Profilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q42418]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.