CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78328	Sorghum	cytosol	37.9	55.29
HORVU1Hr1G075600.2	Barley	cytosol	17.74	48.89
CDY64971	Canola	cytosol	50.0	47.33
CDY32870	Canola	cytosol	49.19	46.56
Bra014545.1-P	Field mustard	cytosol	76.61	46.34
CDY11912	Canola	cytosol	48.39	45.45
CDY48726	Canola	cytosol	41.13	44.35
CDX88579	Canola	cytosol	46.77	43.94
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	45.97	43.51
Os06t0152100-01	Rice	extracellular	45.97	43.51
AT5G56600.1	Thale cress	cytosol	45.16	42.75
EER87860	Sorghum	cytosol	44.35	41.98
Os10t0323900-01	Rice	cytosol, plasma membrane	43.55	41.22
Os10t0323600-01	Rice	cytosol	43.55	41.22
CDX82720	Canola	cytosol	43.55	41.22
CDY35886	Canola	cytosol	43.55	41.22
EES01452	Sorghum	cytosol	43.55	41.22
Zm00001d043523_P001	Maize	cytosol	43.55	40.91
CDX81944	Canola	cytosol	42.74	40.46
Zm00001d012772_P001	Maize	cytosol	42.74	40.46
HORVU1Hr1G075570.2	Barley	cytosol	42.74	40.46
CDY68825	Canola	cytosol	42.74	40.46
CDY03344	Canola	cytosol	42.74	40.46
CDY48724	Canola	cytosol	42.74	40.46
CDY21648	Canola	cytosol	42.74	40.46
CDY06819	Canola	cytosol	42.74	40.46
Zm00001d012773_P003	Maize	cytosol	42.74	40.15
EES19838	Sorghum	cytosol	41.94	39.69
TraesCS7D01G101800.1	Wheat	cytosol	45.97	39.58
TraesCS3B01G311200.1	Wheat	cytosol	41.13	38.93
TraesCS1B01G356700.1	Wheat	cytosol	41.13	38.93
Zm00001d038783_P001	Maize	cytosol	41.13	38.93
CDY06821	Canola	cytosol	41.13	38.06
CDX81945	Canola	cytosol	41.13	38.06
CDY30218	Canola	cytosol	41.13	38.06
CDY35887	Canola	cytosol	41.13	38.06
CDY03342	Canola	cytosol	41.13	38.06
CDY47769	Canola	cytosol	41.13	38.06
CDY48612	Canola	cytosol	41.13	38.06
CDY62034	Canola	cytosol	40.32	37.31
CDY14215	Canola	cytosol	39.52	36.57
Zm00001d010797_P001	Maize	cytosol	40.32	36.5
TraesCS1A01G343400.1	Wheat	cytosol	41.13	35.42
TraesCS3A01G277000.1	Wheat	cytosol	40.32	34.72
CDY03443	Canola	cytosol	18.55	34.33
CDY40192	Canola	cytosol, plastid	20.16	32.05
HORVU7Hr1G022570.1	Barley	cytosol, plastid	45.97	31.67
TraesCS3D01G277200.1	Wheat	cytosol	41.13	31.29
HORVU3Hr1G070490.1	Barley	mitochondrion	41.94	31.14
HORVU2Hr1G073450.7	Barley	extracellular	27.42	26.15
Zm00001d036213_P002	Maize	cytosol	33.06	25.47
CDX82721	Canola	cytosol	24.19	21.58
HORVU2Hr1G048590.3	Barley	plastid	24.19	19.87
CDY13363	Canola	peroxisome, plasma membrane, plastid	32.26	11.59
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	6.45	5.56
HORVU7Hr1G040070.1	Barley	cytosol	1.61	4.55
HORVU3Hr1G070510.2	Barley	cytosol	4.84	4.51

Protein Annotations

EnsemblPlants:CDX99366	EnsemblPlantsGene:GSBRNA2T00107671001	Gene3D:3.30.450.30	GO:A0A078EDZ7	InterPro:PFN	InterPro:PFN_sf
PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	PFAM:PF00235	PRINTS:PR00392	PRINTS:PR01640	ProteinID:CDX99366
ProteinID:CDX99366.1	SUPFAM:SSF55770	UniParc:UPI0004EF2B0B	MapMan:20.2.2.3	:	:

Description

BnaC01g11860D

Coordinates

chrLK031910:+:128279..130677

Molecular Weight (calculated)

14057.1 Da

IEP (calculated)

5.128

GRAVY (calculated)

0.046

Length

124 amino acids

Sequence
(BLAST)

001: MIGKHRTLLL VSTHAEDEIV PFVTHSKLKP EEISGINSVF AEPGMLAPTG LFISGIKYMI IQGELNVVIR GKKCYFLLYI VGSWWCYNKE DHPSLGLFYD
101: EPMTPGQYNM VVERLDDYLT ESGL

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.