CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010331.1-P	Field mustard	cytosol	100.0	100.0
CDY62034	Canola	cytosol	98.51	98.51
CDY48612	Canola	cytosol	94.78	94.78
CDY47769	Canola	cytosol	94.78	94.78
CDY30218	Canola	cytosol	94.78	94.78
CDY06821	Canola	cytosol	94.78	94.78
AT4G29340.1	Thale cress	cytosol	94.03	94.03
CDX81945	Canola	cytosol	92.54	92.54
CDY03342	Canola	cytosol	91.04	91.04
CDY35887	Canola	cytosol	90.3	90.3
CDY48726	Canola	cytosol	71.64	83.48
KRH41476	Soybean	cytosol	82.09	82.71
KRH60195	Soybean	cytosol	81.34	81.95
PGSC0003DMT400042529	Potato	cytosol	79.1	80.92
KRH49003	Soybean	cytosol	79.1	79.7
VIT_11s0016g02940.t01	Wine grape	cytosol	79.1	79.7
KRH74207	Soybean	cytosol	78.36	78.95
PGSC0003DMT400069000	Potato	cytosol	78.36	78.95
Solyc12g044630.1.1	Tomato	cytosol	78.36	78.95
CDY32870	Canola	cytosol	76.87	78.63
Solyc06g066410.2.1	Tomato	cytosol, unclear	76.87	78.63
CDY03344	Canola	cytosol	76.87	78.63
CDY48724	Canola	cytosol	76.87	78.63
CDX81944	Canola	cytosol	76.12	77.86
CDY64971	Canola	cytosol	76.12	77.86
CDY21648	Canola	cytosol	76.12	77.86
CDX82720	Canola	cytosol	76.12	77.86
CDX88579	Canola	cytosol	76.12	77.27
CDY11912	Canola	cytosol	76.12	77.27
CDY35886	Canola	cytosol	75.37	77.1
GSMUA_Achr1P11580_001	Banana	cytosol	75.37	77.1
GSMUA_Achr1P04950_001	Banana	cytosol	75.37	77.1
GSMUA_Achr5P09300_001	Banana	cytosol	74.63	76.34
GSMUA_Achr9P00090_001	Banana	cytosol	74.63	76.34
GSMUA_Achr4P01030_001	Banana	cytosol	73.88	75.57
CDY68825	Canola	cytosol	73.88	75.57
CDY06819	Canola	cytosol	73.88	75.57
GSMUA_Achr6P22530_001	Banana	cytosol	73.13	74.81
PGSC0003DMT400088098	Potato	cytosol	67.91	68.94
CDX82721	Canola	cytosol	63.43	61.15
Solyc11g071210.1.1	Tomato	cytosol	14.18	59.38
CDY03443	Canola	cytosol	29.1	58.21
CDY40192	Canola	cytosol, plastid	23.88	41.03
CDX99366	Canola	cytosol, mitochondrion, vacuole	36.57	39.52
CDY13363	Canola	peroxisome, plasma membrane, plastid	44.03	17.1

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:A0A078FIF0	UniProt:A0A078FIF0	EnsemblPlants:CDY14215	ProteinID:CDY14215
ProteinID:CDY14215.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	EnsemblPlantsGene:GSBRNA2T00078779001	PFAM:PF00235
InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770	UniParc:UPI00015DB2B2	SEG:seg

Description

BnaA08g13460DProfilin [Source:UniProtKB/TrEMBL;Acc:A0A078FIF0]

Coordinates

chrLK032041:-:207364..208598

Molecular Weight (calculated)

14446.2 Da

IEP (calculated)

4.840

GRAVY (calculated)

-0.143

Length

134 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLAAAAIFG HDGSVWAQSA NFPQFKGQEF ANVMKDFDEP GHLAPTGLFL AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLI EQDL

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.