Factsheet for GSMUA_Achr9P00090_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P22530_001	Banana	cytosol	96.18	96.18
GSMUA_Achr1P11580_001	Banana	cytosol	96.18	96.18
GSMUA_Achr4P01030_001	Banana	cytosol	95.42	95.42
GSMUA_Achr5P09300_001	Banana	cytosol	89.31	89.31
GSMUA_Achr1P04950_001	Banana	cytosol	85.5	85.5
GSMUA_Achr8P20180_001	Banana	cytosol	82.44	82.44
GSMUA_Achr2P19390_001	Banana	cytosol	81.68	81.68
VIT_11s0016g02940.t01	Wine grape	cytosol	82.44	81.2
VIT_09s0002g03250.t01	Wine grape	cytosol, extracellular	80.92	80.92
GSMUA_Achr10P...	Banana	cytosol	80.15	80.15
GSMUA_Achr7P13660_001	Banana	cytosol	79.39	79.39
GSMUA_Achr3P17580_001	Banana	cytosol	79.39	79.39
GSMUA_Achr6P14890_001	Banana	cytosol	78.63	78.63
KRH49003	Soybean	cytosol	79.39	78.2
KRH60195	Soybean	cytosol	79.39	78.2
KRH41476	Soybean	cytosol	78.63	77.44
KRH74207	Soybean	cytosol	78.63	77.44
Solyc06g066410.2.1	Tomato	cytosol, unclear	77.1	77.1
CDX81945	Canola	cytosol	78.63	76.87
Solyc12g044630.1.1	Tomato	cytosol	77.86	76.69
PGSC0003DMT400042529	Potato	cytosol	76.34	76.34
CDY48612	Canola	cytosol	77.86	76.12
Bra024148.1-P	Field mustard	cytosol	77.86	76.12
Bra011098.1-P	Field mustard	cytosol	77.86	76.12
CDY47769	Canola	cytosol	77.86	76.12
CDY30218	Canola	cytosol	77.86	76.12
CDY06821	Canola	cytosol	77.86	76.12
PGSC0003DMT400069000	Potato	cytosol	77.1	75.94
GSMUA_Achr5P06510_001	Banana	cytosol	75.57	75.57
Bra039019.1-P	Field mustard	cytosol	77.1	75.37
CDY35887	Canola	cytosol	77.1	75.37
AT4G29340.1	Thale cress	cytosol	77.1	75.37
CDY03342	Canola	cytosol	77.1	75.37
AT2G19770.1	Thale cress	cytosol	76.34	74.63
Bra010331.1-P	Field mustard	cytosol	76.34	74.63
Bra031101.1-P	Field mustard	cytosol	76.34	74.63
Bra036705.1-P	Field mustard	cytosol	76.34	74.63
CDY62034	Canola	cytosol	76.34	74.63
CDY14215	Canola	cytosol	76.34	74.63
KRH09953	Soybean	cytosol	73.28	73.28
PGSC0003DMT400088098	Potato	cytosol	73.28	72.73
CDY48726	Canola	cytosol	61.83	70.43
Solyc11g071210.1.1	Tomato	cytosol	16.03	65.62
CDX82721	Canola	cytosol	54.96	51.8

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	EnsemblPlantsGene:GSMUA_Achr9G00090_001	EnsemblPlants:GSMUA_Achr9P00090_001
EnsemblPlants:GSMUA_Achr9T00090_001	UniProt:M0TW66	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI0002958D99	:	:	:	:

Description

Profilin-3 [Source:GMGC_GENE;Acc:GSMUA_Achr9G00090_001]

Coordinates

chr9:+:149324..151992

Molecular Weight (calculated)

14215.1 Da

IEP (calculated)

4.478

GRAVY (calculated)

-0.088

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCEIEGHHL TAAAIVGQDG SVWAQSASFP QVKPEEMTNI INDFNEPGTL APIGLFLGST KYMVIQGEPG AVIRGKKGSG GITVKKTNQA
101: LIFGIYDEPM TPGQCNMVVE RLGDYLIDQG L

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.