CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g03250.t01	Wine grape	cytosol, extracellular	80.92	80.92
KRH74207	Soybean	cytosol	81.68	80.45
KRH41476	Soybean	cytosol	80.92	79.7
KRH60197	Soybean	cytosol	79.39	79.39
KRH49003	Soybean	cytosol	79.39	78.2
KRH60195	Soybean	cytosol	79.39	78.2
KRH41478	Soybean	cytosol	77.86	77.86
KRH41477	Soybean	nucleus	76.34	76.34
GSMUA_Achr4P01030_001	Banana	cytosol	74.05	74.05
GSMUA_Achr1P11580_001	Banana	cytosol	73.28	73.28
GSMUA_Achr6P22530_001	Banana	cytosol	73.28	73.28
GSMUA_Achr9P00090_001	Banana	cytosol	73.28	73.28
GSMUA_Achr5P09300_001	Banana	cytosol	72.52	72.52
GSMUA_Achr1P04950_001	Banana	cytosol	71.76	71.76

Protein Annotations

EntrezGene:100809393	MapMan:20.2.2.3	Gene3D:3.30.450.30	EMBL:ACUP02009115	EnsemblPlantsGene:GLYMA_15G020700	GO:GO:0003674
GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005938	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0042989	UniProt:I1MCV8	EnsemblPlants:KRH09953	ProteinID:KRH09953
ProteinID:KRH09953.1	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640
ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770
UniParc:UPI000233B2F3	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:1603915..1605757

Molecular Weight (calculated)

14065.0 Da

IEP (calculated)

4.674

GRAVY (calculated)

0.004

Length

131 amino acids

Sequence
(BLAST)

001: MSWQSYVDDH LMCDFDGHAL AAAAIIGHDG TVWAQSSKFP QFKGEEIVAI MKDFDEPGSL APTGLHLGDT KYMVIQGEPG AVIRGKKGAG GVTVKKTTQA
101: LVIGIYEEPL TPGQCNMIVE RLGDYLVELG L

Best Arabidopsis Sequence Match ( AT2G19760.1 )
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L

Arabidopsis Description

PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.