CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49003	Soybean	cytosol	97.74	97.74
KRH41476	Soybean	cytosol	90.98	90.98
KRH60195	Soybean	cytosol	88.72	88.72
VIT_11s0016g02940.t01	Wine grape	cytosol	86.47	86.47
Solyc12g044630.1.1	Tomato	cytosol	82.71	82.71
PGSC0003DMT400069000	Potato	cytosol	81.95	81.95
KRH09953	Soybean	cytosol	80.45	81.68
Bra036705.1-P	Field mustard	cytosol	81.95	81.34
CDY03342	Canola	cytosol	81.2	80.6
PGSC0003DMT400042529	Potato	cytosol	78.95	80.15
CDY06821	Canola	cytosol	80.45	79.85
CDY30218	Canola	cytosol	80.45	79.85
Bra024148.1-P	Field mustard	cytosol	80.45	79.85
CDY47769	Canola	cytosol	80.45	79.85
CDY48612	Canola	cytosol	80.45	79.85
Bra011098.1-P	Field mustard	cytosol	80.45	79.85
Solyc06g066410.2.1	Tomato	cytosol, unclear	78.2	79.39
GSMUA_Achr6P22530_001	Banana	cytosol	78.2	79.39
GSMUA_Achr4P01030_001	Banana	cytosol	78.2	79.39
GSMUA_Achr1P11580_001	Banana	cytosol	78.2	79.39
AT4G29340.1	Thale cress	cytosol	79.7	79.1
CDY62034	Canola	cytosol	79.7	79.1
CDX81945	Canola	cytosol	79.7	79.1
GSMUA_Achr5P09300_001	Banana	cytosol	77.44	78.63
GSMUA_Achr9P00090_001	Banana	cytosol	77.44	78.63
AT2G19770.1	Thale cress	cytosol	78.95	78.36
Bra010331.1-P	Field mustard	cytosol	78.95	78.36
Bra039019.1-P	Field mustard	cytosol	78.95	78.36
CDY14215	Canola	cytosol	78.95	78.36
CDY35887	Canola	cytosol	78.95	78.36
KRH60197	Soybean	cytosol	76.69	77.86
Bra031101.1-P	Field mustard	cytosol	78.2	77.61
CDY48726	Canola	cytosol	66.92	77.39
KRH41477	Soybean	nucleus	75.19	76.34
KRH41478	Soybean	cytosol	74.44	75.57
GSMUA_Achr1P04950_001	Banana	cytosol	73.68	74.81
PGSC0003DMT400088098	Potato	cytosol	72.18	72.73
Solyc11g071210.1.1	Tomato	cytosol	15.79	65.62
CDX82721	Canola	cytosol	56.39	53.96

Protein Annotations

EntrezGene:100778045	MapMan:20.2.2.3	Gene3D:3.30.450.30	EMBL:ACUP02000008	EnsemblPlantsGene:GLYMA_01G005900	GO:GO:0003674
GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005938	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0042989	UniProt:I1J4G4	EnsemblPlants:KRH74207	ProteinID:KRH74207
ProteinID:KRH74207.1	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640
ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770
UniParc:UPI0002336D8C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:576688..580396

Molecular Weight (calculated)

14244.0 Da

IEP (calculated)

5.069

GRAVY (calculated)

-0.202

Length

133 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCDIDGTGH HLSSSAIIGH DGSVWAQSSS FPQIKSDEIN GIMKDFDEPG HLAPTGLHLG GTKYMVIQGE PGAVIRGKKG SGGITIKKTG
101: QALVFGIYDE PVTPGQCNMI VERLGDYLVD QGL

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.