Factsheet for Solyc12g044630.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069000	Potato	cytosol	98.5	98.5
Solyc06g066410.2.1	Tomato	cytosol, unclear	87.22	88.55
KRH49003	Soybean	cytosol	84.21	84.21
KRH60195	Soybean	cytosol	84.21	84.21
KRH41476	Soybean	cytosol	82.71	82.71
KRH74207	Soybean	cytosol	82.71	82.71
Bra036705.1-P	Field mustard	cytosol	81.95	81.34
VIT_11s0016g02940.t01	Wine grape	cytosol	81.2	81.2
GSMUA_Achr1P11580_001	Banana	cytosol	79.7	80.92
CDY03342	Canola	cytosol	81.2	80.6
CDY06821	Canola	cytosol	80.45	79.85
CDY48612	Canola	cytosol	80.45	79.85
CDY47769	Canola	cytosol	80.45	79.85
CDY30218	Canola	cytosol	80.45	79.85
Bra024148.1-P	Field mustard	cytosol	80.45	79.85
Bra011098.1-P	Field mustard	cytosol	80.45	79.85
GSMUA_Achr5P09300_001	Banana	cytosol	78.2	79.39
CDY35887	Canola	cytosol	79.7	79.1
CDX81945	Canola	cytosol	79.7	79.1
Bra039019.1-P	Field mustard	cytosol	79.7	79.1
Solyc11g070130.1.1	Tomato	extracellular	77.44	78.63
GSMUA_Achr4P01030_001	Banana	cytosol	77.44	78.63
CDY62034	Canola	cytosol	78.95	78.36
AT2G19770.1	Thale cress	cytosol	78.95	78.36
CDY14215	Canola	cytosol	78.95	78.36
Bra010331.1-P	Field mustard	cytosol	78.95	78.36
AT4G29340.1	Thale cress	cytosol	78.95	78.36
GSMUA_Achr6P22530_001	Banana	cytosol	76.69	77.86
GSMUA_Achr9P00090_001	Banana	cytosol	76.69	77.86
Bra031101.1-P	Field mustard	cytosol	78.2	77.61
CDY48726	Canola	cytosol	65.41	75.65
Solyc08g066110.2.1	Tomato	plastid	74.44	75.57
GSMUA_Achr1P04950_001	Banana	cytosol	72.18	73.28
Solyc11g071210.1.1	Tomato	cytosol	16.54	68.75
Solyc12g008590.1.1	Tomato	cytosol	48.87	66.33
CDX82721	Canola	cytosol	53.38	51.08

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0003785	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005938	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0042989
PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414
PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	UniProt:Q41344	SMART:SM00392	SUPFAM:SSF55770
EnsemblPlantsGene:Solyc12g044630.1	EnsemblPlants:Solyc12g044630.1.1	EMBL:U50195	UniParc:UPI000013226D	SEG:seg	:

Description

PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41344]

Coordinates

chr12:-:38190602..38191245

Molecular Weight (calculated)

14435.3 Da

IEP (calculated)

4.845

GRAVY (calculated)

-0.126

Length

133 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCDIEGTGH HLSSAAILGF DGSVWAQSPN FPKFKAEEIT NIMKDFDEPG HLAPTGLFLA GTKYMVIQGE PGAVIRGKKG PGGITIKKTA
101: QALIFGVYEE PVTPGQCNMV VEKIGDYLVD QGY

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.