CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039019.1-P	Field mustard	cytosol	66.19	68.66
CDY35887	Canola	cytosol	66.19	68.66
CDX81945	Canola	cytosol	64.03	66.42
CDY03342	Canola	cytosol	64.03	66.42
AT2G19770.1	Thale cress	cytosol	63.31	65.67
CDY48612	Canola	cytosol	61.15	63.43
CDY62034	Canola	cytosol	61.15	63.43
CDY47769	Canola	cytosol	61.15	63.43
CDY30218	Canola	cytosol	61.15	63.43
CDY14215	Canola	cytosol	61.15	63.43
CDY06821	Canola	cytosol	61.15	63.43
KRH60195	Soybean	cytosol	56.83	59.4
KRH41476	Soybean	cytosol	56.83	59.4
CDY64971	Canola	cytosol	55.4	58.78
CDY32870	Canola	cytosol	55.4	58.78
CDY11912	Canola	cytosol	55.4	58.33
CDX88579	Canola	cytosol	54.68	57.58
GSMUA_Achr1P04950_001	Banana	cytosol	53.96	57.25
CDY03344	Canola	cytosol	53.24	56.49
CDX82720	Canola	cytosol	53.24	56.49
CDY48724	Canola	cytosol	53.24	56.49
VIT_11s0016g02940.t01	Wine grape	cytosol	53.96	56.39
KRH74207	Soybean	cytosol	53.96	56.39
KRH49003	Soybean	cytosol	53.96	56.39
GSMUA_Achr5P09300_001	Banana	cytosol	52.52	55.73
PGSC0003DMT400042529	Potato	cytosol	52.52	55.73
CDY35886	Canola	cytosol	52.52	55.73
CDY21648	Canola	cytosol	52.52	55.73
CDX81944	Canola	cytosol	52.52	55.73
CDY06819	Canola	cytosol	51.8	54.96
GSMUA_Achr1P11580_001	Banana	cytosol	51.8	54.96
GSMUA_Achr4P01030_001	Banana	cytosol	51.8	54.96
GSMUA_Achr9P00090_001	Banana	cytosol	51.8	54.96
CDY68825	Canola	cytosol	51.8	54.96
CDY48726	Canola	cytosol	45.32	54.78
Solyc06g066410.2.1	Tomato	cytosol, unclear	51.08	54.2
Solyc12g044630.1.1	Tomato	cytosol	51.08	53.38
GSMUA_Achr6P22530_001	Banana	cytosol	49.64	52.67
PGSC0003DMT400069000	Potato	cytosol	50.36	52.63
Solyc11g071210.1.1	Tomato	cytosol	11.51	50.0
PGSC0003DMT400088098	Potato	cytosol	45.32	47.73
CDY03443	Canola	cytosol	18.7	38.81
CDX99366	Canola	cytosol, mitochondrion, vacuole	21.58	24.19
CDY40192	Canola	cytosol, plastid	8.63	15.38
CDY13363	Canola	peroxisome, plasma membrane, plastid	30.94	12.46

Protein Annotations

EnsemblPlants:CDX82721	EnsemblPlantsGene:GSBRNA2T00137993001	Gene3D:3.30.450.30	GO:A0A078D007	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	InterPro:PFN	InterPro:PFN_sf	InterPro:Profilin_CS	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	PFAM:PF00235	PRINTS:PR01640	ProteinID:CDX82721	ProteinID:CDX82721.1	ScanProsite:PS00414
SMART:SM00392	SUPFAM:SSF55770	UniParc:UPI0004EDAE4D	MapMan:20.2.2.3	:	:

Description

BnaC07g01450D

Coordinates

chrLK031829:-:1623727..1625046

Molecular Weight (calculated)

15502.5 Da

IEP (calculated)

4.080

GRAVY (calculated)

0.153

Length

139 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTSAAIIG LDGSVWAQSA NFPQVTLCLL LDQTAYETMD TLSLYYFFAF AYTFNGQIYN HLISGVMNLV SELKNVISGI
101: TIKKTGQSMV FGLYEEPVTP GQCNMVVERL GDYLIEQDL

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.