Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039018.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY35886 | Canola | cytosol | 99.24 | 99.24 |
| CDY48724 | Canola | cytosol | 97.71 | 97.71 |
| CDY03344 | Canola | cytosol | 97.71 | 97.71 |
| CDX81944 | Canola | cytosol | 96.95 | 96.95 |
| CDY21648 | Canola | cytosol | 96.95 | 96.95 |
| AT2G19760.1 | Thale cress | cytosol | 90.84 | 90.84 |
| CDY68825 | Canola | cytosol | 89.31 | 89.31 |
| CDY06819 | Canola | cytosol | 89.31 | 89.31 |
| CDY32870 | Canola | cytosol | 87.79 | 87.79 |
| CDY64971 | Canola | cytosol | 87.02 | 87.02 |
| CDY11912 | Canola | cytosol | 83.21 | 82.58 |
| CDX88579 | Canola | cytosol | 82.44 | 81.82 |
| CDY47769 | Canola | cytosol | 79.39 | 77.61 |
| CDY30218 | Canola | cytosol | 79.39 | 77.61 |
| CDY48612 | Canola | cytosol | 79.39 | 77.61 |
| CDY06821 | Canola | cytosol | 79.39 | 77.61 |
| EES01452 | Sorghum | cytosol | 77.1 | 77.1 |
| Os10t0323600-01 | Rice | cytosol | 77.1 | 77.1 |
| Os10t0323900-01 | Rice | cytosol, plasma membrane | 77.1 | 77.1 |
| TraesCS7A01G107400.1 | Wheat | cytosol, golgi, plastid | 77.1 | 77.1 |
| CDY62034 | Canola | cytosol | 78.63 | 76.87 |
| CDX81945 | Canola | cytosol | 78.63 | 76.87 |
| Os06t0152100-01 | Rice | extracellular | 76.34 | 76.34 |
| TraesCS3B01G311200.1 | Wheat | cytosol | 76.34 | 76.34 |
| EER87860 | Sorghum | cytosol | 76.34 | 76.34 |
| CDY14215 | Canola | cytosol | 77.86 | 76.12 |
| Zm00001d043523_P001 | Maize | cytosol | 76.34 | 75.76 |
| HORVU1Hr1G075570.2 | Barley | cytosol | 75.57 | 75.57 |
| TraesCS1B01G356700.1 | Wheat | cytosol | 75.57 | 75.57 |
| CDY35887 | Canola | cytosol | 77.1 | 75.37 |
| CDY03342 | Canola | cytosol | 77.1 | 75.37 |
| OQU78328 | Sorghum | cytosol | 48.85 | 75.29 |
| Zm00001d012773_P003 | Maize | cytosol | 75.57 | 75.0 |
| Zm00001d012772_P001 | Maize | cytosol | 74.81 | 74.81 |
| EES19838 | Sorghum | cytosol | 74.05 | 74.05 |
| HORVU1Hr1G075600.2 | Barley | cytosol | 25.19 | 73.33 |
| Zm00001d038783_P001 | Maize | cytosol | 72.52 | 72.52 |
| TraesCS7D01G101800.1 | Wheat | cytosol | 78.63 | 71.53 |
| TraesCS1A01G343400.1 | Wheat | cytosol | 75.57 | 68.75 |
| CDY48726 | Canola | cytosol | 60.31 | 68.7 |
| Zm00001d010797_P001 | Maize | cytosol | 71.76 | 68.61 |
| TraesCS3A01G277000.1 | Wheat | cytosol | 74.81 | 68.06 |
| HORVU7Hr1G040070.1 | Barley | cytosol | 21.37 | 63.64 |
| TraesCS3D01G277200.1 | Wheat | cytosol | 76.34 | 61.35 |
| CDY03443 | Canola | cytosol | 31.3 | 61.19 |
| HORVU3Hr1G070490.1 | Barley | mitochondrion | 76.34 | 59.88 |
| HORVU7Hr1G022570.1 | Barley | cytosol, plastid | 77.86 | 56.67 |
| CDX82721 | Canola | cytosol | 56.49 | 53.24 |
| Zm00001d036213_P002 | Maize | cytosol | 57.25 | 46.58 |
| CDY40192 | Canola | cytosol, plastid | 25.95 | 43.59 |
| CDX99366 | Canola | cytosol, mitochondrion, vacuole | 41.22 | 43.55 |
| HORVU2Hr1G073450.7 | Barley | extracellular | 35.11 | 35.38 |
| HORVU3Hr1G070510.2 | Barley | cytosol | 33.59 | 33.08 |
| HORVU2Hr1G048590.3 | Barley | plastid | 31.3 | 27.15 |
| HORVU5Hr1G053460.1 | Barley | cytosol, nucleus, plastid | 25.19 | 22.92 |
| CDY13363 | Canola | peroxisome, plasma membrane, plastid | 52.67 | 20.0 |
Protein Annotations
| EnsemblPlants:CDX82720 | EnsemblPlantsGene:GSBRNA2T00137992001 | Gene3D:3.30.450.30 | GO:A0A078D0U9 | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:PFN | InterPro:PFN_sf | InterPro:Profilin_CS | PANTHER:PTHR11604 |
| PANTHER:PTHR11604:SF7 | PFAM:PF00235 | PRINTS:PR00392 | PRINTS:PR01640 | ProteinID:CDX82720 | ProteinID:CDX82720.1 |
| ScanProsite:PS00414 | SMART:SM00392 | SUPFAM:SSF55770 | UniParc:UPI0002541002 | MapMan:20.2.2.3 | : |
Description
BnaC07g01460D
Coordinates
chrLK031829:-:1618740..1619928
Molecular Weight (calculated)
14042.8 Da
IEP (calculated)
4.302
GRAVY (calculated)
-0.063
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSANFP QLKPEEIKGI TTDFEEPGFL APTGLFLGGA KYMVIQGEPG AVIRGKKGPG GVTIKKTTQA
101: LVIGIYEEPM TGGQCNLVVE RLGDYLIESD L
101: LVIGIYEEPM TGGQCNLVVE RLGDYLIESD L
001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
Arabidopsis Description
PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.