Factsheet for Bra039018.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82720	Canola	cytosol	100.0	100.0
CDY35886	Canola	cytosol	99.24	99.24
Bra036707.1-P	Field mustard	cytosol	97.71	97.71
Bra031097.1-P	Field mustard	cytosol	96.95	96.95
AT2G19760.1	Thale cress	cytosol	90.84	90.84
Bra011099.1-P	Field mustard	cytosol	89.31	89.31
Bra002804.1-P	Field mustard	cytosol	87.79	87.79
Bra006865.1-P	Field mustard	cytosol	81.68	79.85
Bra011098.1-P	Field mustard	cytosol	79.39	77.61
Bra024148.1-P	Field mustard	cytosol	79.39	77.61
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	77.1	77.1
Os10t0323600-01	Rice	cytosol	77.1	77.1
EES01452	Sorghum	cytosol	77.1	77.1
Os10t0323900-01	Rice	cytosol, plasma membrane	77.1	77.1
TraesCS3B01G311200.1	Wheat	cytosol	76.34	76.34
EER87860	Sorghum	cytosol	76.34	76.34
Os06t0152100-01	Rice	extracellular	76.34	76.34
Bra010331.1-P	Field mustard	cytosol	77.86	76.12
Zm00001d043523_P001	Maize	cytosol	76.34	75.76
TraesCS1B01G356700.1	Wheat	cytosol	75.57	75.57
HORVU1Hr1G075570.2	Barley	cytosol	75.57	75.57
Bra031101.1-P	Field mustard	cytosol	77.1	75.37
Bra039019.1-P	Field mustard	cytosol	77.1	75.37
OQU78328	Sorghum	cytosol	48.85	75.29
Zm00001d012773_P003	Maize	cytosol	75.57	75.0
Zm00001d012772_P001	Maize	cytosol	74.81	74.81
Bra036705.1-P	Field mustard	cytosol	76.34	74.63
EES19838	Sorghum	cytosol	74.05	74.05
HORVU1Hr1G075600.2	Barley	cytosol	25.19	73.33
Zm00001d038783_P001	Maize	cytosol	72.52	72.52
TraesCS7D01G101800.1	Wheat	cytosol	78.63	71.53
TraesCS1A01G343400.1	Wheat	cytosol	75.57	68.75
Zm00001d010797_P001	Maize	cytosol	71.76	68.61
TraesCS3A01G277000.1	Wheat	cytosol	74.81	68.06
HORVU7Hr1G040070.1	Barley	cytosol	21.37	63.64
TraesCS3D01G277200.1	Wheat	cytosol	76.34	61.35
HORVU3Hr1G070490.1	Barley	mitochondrion	76.34	59.88
HORVU7Hr1G022570.1	Barley	cytosol, plastid	77.86	56.67
Zm00001d036213_P002	Maize	cytosol	57.25	46.58
HORVU2Hr1G073450.7	Barley	extracellular	35.11	35.38
HORVU3Hr1G070510.2	Barley	cytosol	33.59	33.08
Bra014545.1-P	Field mustard	cytosol	45.04	28.78
HORVU2Hr1G048590.3	Barley	plastid	31.3	27.15
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	25.19	22.92

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EnsemblPlantsGene:Bra039018	EnsemblPlants:Bra039018.1	EnsemblPlants:Bra039018.1-P	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	UniProt:M4FD48	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI0002541002	:	:	:	:

Description

AT2G19760 (E=1e-066) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding

Coordinates

chrA07:+:785285..785964

Molecular Weight (calculated)

14042.8 Da

IEP (calculated)

4.302

GRAVY (calculated)

-0.063

Length

131 amino acids

Sequence
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSANFP QLKPEEIKGI TTDFEEPGFL APTGLFLGGA KYMVIQGEPG AVIRGKKGPG GVTIKKTTQA
101: LVIGIYEEPM TGGQCNLVVE RLGDYLIESD L

Best Arabidopsis Sequence Match ( AT2G19760.1 )
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L

Arabidopsis Description

PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.