Factsheet for Zm00001d010797_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78328	Sorghum	cytosol	58.39	94.12
Zm00001d012772_P001	Maize	cytosol	87.59	91.6
HORVU1Hr1G075600.2	Barley	cytosol	29.93	91.11
Zm00001d038783_P001	Maize	cytosol	86.13	90.08
EES19838	Sorghum	cytosol	86.13	90.08
Zm00001d012773_P003	Maize	cytosol	85.4	88.64
Zm00001d043523_P001	Maize	cytosol	84.67	87.88
HORVU1Hr1G075570.2	Barley	cytosol	77.37	80.92
TraesCS1B01G356700.1	Wheat	cytosol	76.64	80.15
Bra031097.1-P	Field mustard	cytosol	70.8	74.05
CDX81944	Canola	cytosol	70.8	74.05
CDY21648	Canola	cytosol	70.8	74.05
AT4G29350.1	Thale cress	cytosol	70.07	73.28
CDY48724	Canola	cytosol	70.07	73.28
Bra036707.1-P	Field mustard	cytosol	70.07	73.28
CDY03344	Canola	cytosol	70.07	73.28
TraesCS1A01G343400.1	Wheat	cytosol	76.64	72.92
Bra002804.1-P	Field mustard	cytosol	69.34	72.52
CDY32870	Canola	cytosol	69.34	72.52
CDY35886	Canola	cytosol	68.61	71.76
Bra039018.1-P	Field mustard	cytosol	68.61	71.76
CDX82720	Canola	cytosol	68.61	71.76
CDY64971	Canola	cytosol	68.61	71.76
CDY68825	Canola	cytosol	67.88	70.99
AT2G19760.1	Thale cress	cytosol	67.88	70.99
Bra011099.1-P	Field mustard	cytosol	67.88	70.99
CDY06819	Canola	cytosol	67.88	70.99
AT5G56600.1	Thale cress	cytosol	66.42	69.47
CDY11912	Canola	cytosol	66.42	68.94
CDX88579	Canola	cytosol	65.69	68.18
Bra006865.1-P	Field mustard	cytosol	65.69	67.16
CDY03443	Canola	cytosol	26.28	53.73
Zm00001d036213_P002	Maize	cytosol	56.93	48.45
CDY40192	Canola	cytosol, plastid	24.09	42.31
CDX99366	Canola	cytosol, mitochondrion, vacuole	36.5	40.32
Bra014545.1-P	Field mustard	cytosol	40.88	27.32
CDY13363	Canola	peroxisome, plasma membrane, plastid	40.15	15.94

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EntrezGene:542410	ProteinID:AQK94982.1	UniProt:B6T6Y5	EMBL:EU960750
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	PFAM:PF00235	InterPro:PFN
InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI000016E071	EnsemblPlantsGene:Zm00001d010797	EnsemblPlants:Zm00001d010797_P001	EnsemblPlants:Zm00001d010797_T001	SEG:seg

Description

profilin homolog2 profilin homolog2

Coordinates

chr8:-:128115856..128116962

Molecular Weight (calculated)

14811.9 Da

IEP (calculated)

4.904

GRAVY (calculated)

-0.166

Length

137 amino acids

Sequence
(BLAST)

001: MSDRAKMSWQ AYVDEHLMCE IEGHHLAAAA IVGHDGAAWA QSTAFPEFKT EDMANIMKDF DEPGHLAPTG LFLGPTKYMV IQGEPGAVIR GKKGSGGITV
101: KKTGQALVVG IYDEPMTPGQ CNMVVERLGD YLLEQGM

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.