CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78328	Sorghum	cytosol	64.89	100.0
EES01452	Sorghum	cytosol	92.37	92.37
Zm00001d038783_P001	Maize	cytosol	90.08	90.08
HORVU1Hr1G075600.2	Barley	cytosol	30.53	88.89
Zm00001d010797_P001	Maize	cytosol	90.08	86.13
HORVU1Hr1G075570.2	Barley	cytosol	83.97	83.97
TraesCS1B01G356700.1	Wheat	cytosol	83.21	83.21
EER87860	Sorghum	cytosol	80.92	80.92
TraesCS1A01G343400.1	Wheat	cytosol	83.21	75.69
Bra002804.1-P	Field mustard	cytosol	74.81	74.81
CDY32870	Canola	cytosol	74.81	74.81
CDY35886	Canola	cytosol	74.05	74.05
CDY21648	Canola	cytosol	74.05	74.05
CDY48724	Canola	cytosol	74.05	74.05
CDY64971	Canola	cytosol	74.05	74.05
CDY03344	Canola	cytosol	74.05	74.05
CDX82720	Canola	cytosol	74.05	74.05
CDX81944	Canola	cytosol	74.05	74.05
Bra039018.1-P	Field mustard	cytosol	74.05	74.05
Bra036707.1-P	Field mustard	cytosol	74.05	74.05
Bra031097.1-P	Field mustard	cytosol	74.05	74.05
AT4G29350.1	Thale cress	cytosol	73.28	73.28
CDY68825	Canola	cytosol	72.52	72.52
CDY06819	Canola	cytosol	72.52	72.52
Bra011099.1-P	Field mustard	cytosol	72.52	72.52
AT2G19760.1	Thale cress	cytosol	72.52	72.52
CDY11912	Canola	cytosol	71.76	71.21
AT5G56600.1	Thale cress	cytosol	70.99	70.99
Bra006865.1-P	Field mustard	cytosol	71.76	70.15
CDX88579	Canola	cytosol	70.23	69.7
CDY03443	Canola	cytosol	27.48	53.73
CDY40192	Canola	cytosol, plastid	25.95	43.59
CDX99366	Canola	cytosol, mitochondrion, vacuole	39.69	41.94
KXG31648	Sorghum	plastid	51.15	36.22
Bra014545.1-P	Field mustard	cytosol	43.51	27.8
CDY13363	Canola	peroxisome, plasma membrane, plastid	43.51	16.52

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EntrezGene:8083003	UniProt:C5Z1D7	EnsemblPlants:EES19838	ProteinID:EES19838
ProteinID:EES19838.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005938
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0042989	PFAM:PF00235
InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	EnsemblPlantsGene:SORBI_3009G203900	SUPFAM:SSF55770	UniParc:UPI0001A890F1
RefSeq:XP_002441408.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:55267028..55268061

Molecular Weight (calculated)

14213.1 Da

IEP (calculated)

4.693

GRAVY (calculated)

-0.156

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCEIEGHHL TSAAIAGHDG AVWAQSATFP EFKPEDMTNI MKDFDEPGHL APTGLFLGAT KYMVIQGEPG AVIRGKKGSG GITVKKTGQA
101: LIIGIYDEPM TPGQCNMVVE RLGDYLVEQG M

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.