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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • cytosol 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G110000.1 Wheat cytosol 42.16 59.54
TraesCS3B01G127200.1 Wheat cytosol 42.16 59.54
TraesCS3A01G108200.1 Wheat cytosol 42.16 59.54
HORVU3Hr1G019670.1 Barley cytosol 42.16 59.54
PGSC0003DMT400000786 Potato cytosol 41.08 58.02
GSMUA_Achr3P17580_001 Banana cytosol 41.08 58.02
KRH60197 Soybean cytosol 41.08 58.02
GSMUA_Achr2P19390_001 Banana cytosol 40.54 57.25
OQU78328 Sorghum cytosol 25.95 56.47
PGSC0003DMT400065464 Potato cytosol 39.46 55.73
KRH41477 Soybean nucleus 39.46 55.73
GSMUA_Achr7P13660_001 Banana cytosol 39.46 55.73
GSMUA_Achr5P06510_001 Banana cytosol 39.46 55.73
GSMUA_Achr8P20180_001 Banana cytosol 38.92 54.96
KRH41478 Soybean cytosol 38.92 54.96
GSMUA_Achr10P... Banana cytosol 38.92 54.96
GSMUA_Achr6P14890_001 Banana cytosol 38.38 54.2
Solyc08g066110.2.1 Tomato plastid 37.84 53.44
VIT_11s0016g02950.t01 Wine grape cytosol 37.84 53.44
Solyc12g008590.1.1 Tomato cytosol 28.11 53.06
PGSC0003DMT400047737 Potato cytosol 36.76 51.91
Solyc11g070130.1.1 Tomato extracellular 36.22 51.15
EES19838 Sorghum cytosol 36.22 51.15
EES01452 Sorghum cytosol 36.22 51.15
EER87860 Sorghum cytosol 36.22 51.15
Os01t0191150-00 Rice endoplasmic reticulum, extracellular 12.97 41.38
Protein Annotations
EnsemblPlants:KXG31648EnsemblPlantsGene:SORBI_3003G035200Gene3D:3.30.450.30GO:GO:0003674GO:GO:0003779GO:GO:0005488
GO:GO:0005515InterPro:PFNInterPro:PFN_sfPANTHER:PTHR11604PANTHER:PTHR11604:SF7PFAM:PF00235
PRINTS:PR00392PRINTS:PR01640ProteinID:KXG31648ProteinID:KXG31648.1SEG:segSMART:SM00392
SUPFAM:SSF55770UniParc:UPI00081AC439UniProt:A0A1B6Q155MapMan:20.2.2.3::
Description
hypothetical protein
Coordinates
chr3:+:3222669..3226196
Molecular Weight (calculated)
20450.5 Da
IEP (calculated)
11.896
GRAVY (calculated)
-0.808
Length
185 amino acids
Sequence
(BLAST)
001: MERNPSALSS SPHNGISRKH RGRRAAGSGE SATASPRARD QVRQENRRGR GAMSWQAYVD EHLLCDIDGQ TSASPPRRRR HPRPRRRCLG AARCLPTGQT
101: RRNHFRPVVM NDFNEPGSLA PTGLYLGGSK YMAIQGKPRV FIREKKGPGG VTIKKTSLAI ITGIYEEPMA RRLASANVVV ERLGD
Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)
001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL
Arabidopsis Description
PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.