Factsheet for HORVU3Hr1G019670.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G110000.1	Wheat	cytosol	99.24	99.24
TraesCS3A01G108200.1	Wheat	cytosol	98.47	98.47
TraesCS3B01G127200.1	Wheat	cytosol	96.95	96.95
HORVU7Hr1G040070.1	Barley	cytosol	32.06	95.45
GSMUA_Achr3P17580_001	Banana	cytosol	84.73	84.73
GSMUA_Achr7P13660_001	Banana	cytosol	83.97	83.97
GSMUA_Achr10P...	Banana	cytosol	82.44	82.44
GSMUA_Achr6P14890_001	Banana	cytosol	81.68	81.68
GSMUA_Achr2P19390_001	Banana	cytosol	80.92	80.92
GSMUA_Achr8P20180_001	Banana	cytosol	80.92	80.92
KRH60197	Soybean	cytosol	79.39	79.39
PGSC0003DMT400065464	Potato	cytosol	79.39	79.39
VIT_11s0016g02950.t01	Wine grape	cytosol	77.1	77.1
GSMUA_Achr5P06510_001	Banana	cytosol	77.1	77.1
KRH41477	Soybean	nucleus	77.1	77.1
KRH41478	Soybean	cytosol	77.1	77.1
PGSC0003DMT400047737	Potato	cytosol	77.1	77.1
Solyc11g070130.1.1	Tomato	extracellular	75.57	75.57
PGSC0003DMT400000786	Potato	cytosol	75.57	75.57
HORVU1Hr1G075600.2	Barley	cytosol	25.95	75.56
HORVU1Hr1G075570.2	Barley	cytosol	74.81	74.81
Solyc08g066110.2.1	Tomato	plastid	74.81	74.81
Solyc12g008590.1.1	Tomato	cytosol	51.15	68.37
Os01t0191150-00	Rice	endoplasmic reticulum, extracellular	27.48	62.07
HORVU3Hr1G070490.1	Barley	mitochondrion	77.86	61.08
HORVU7Hr1G022570.1	Barley	cytosol, plastid	79.39	57.78
KXG31648	Sorghum	plastid	59.54	42.16
HORVU2Hr1G073450.7	Barley	extracellular	36.64	36.92
HORVU3Hr1G070510.2	Barley	cytosol	32.82	32.33
HORVU2Hr1G048590.3	Barley	plastid	36.64	31.79
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	25.19	22.92

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EMBL:AK375203	UniProt:F2EGC6	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
EnsemblPlantsGene:HORVU3Hr1G019670	EnsemblPlants:HORVU3Hr1G019670.1	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI00020089F1	:	:	:	:

Description

Profilin [Source:UniProtKB/TrEMBL;Acc:F2EGC6]

Coordinates

chrchr3H:-:56863527..56866758

Molecular Weight (calculated)

14071.9 Da

IEP (calculated)

4.142

GRAVY (calculated)

0.006

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDEQ LLCDIDGQRL AAAAILGHDG AVWAQSEPFP EVKPEEITAV INDFDEPGSL APTGLFLGGT KYMVIQGEPG AVIRGKKGSG GVTIKKTSLA
101: IIIGIYEEPM TPGQCNMVVE RLGDYLLEQG F

Best Arabidopsis Sequence Match ( AT5G56600.1 )
(BLAST)

001: MSWQTYVDDH LMCDVAGNRL TAAAILGQDG SVWAQSNNFP QVKPEEIQGI KDDFTTPGTL APTGLFLGGN KYMVIQGEPN AVIRGKKGAG GVTIKKTTLA
101: LVFGIYDEPM TPGQCNMVVE NLGEYLIESG L

Arabidopsis Description

PRO5Profilin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE63]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.