Factsheet for HORVU1Hr1G075570.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G075600.2	Barley	cytosol	33.59	97.78
TraesCS1B01G356700.1	Wheat	cytosol	93.89	93.89
OQU78328	Sorghum	cytosol	55.73	85.88
TraesCS1A01G343400.1	Wheat	cytosol	93.89	85.42
EES19838	Sorghum	cytosol	83.97	83.97
Zm00001d038783_P001	Maize	cytosol	78.63	78.63
CDY32870	Canola	cytosol	77.86	77.86
Bra002804.1-P	Field mustard	cytosol	77.86	77.86
Zm00001d010797_P001	Maize	cytosol	80.92	77.37
CDY64971	Canola	cytosol	77.1	77.1
CDY11912	Canola	cytosol	77.1	76.52
CDY35886	Canola	cytosol	76.34	76.34
Bra036707.1-P	Field mustard	cytosol	75.57	75.57
CDY48724	Canola	cytosol	75.57	75.57
CDY21648	Canola	cytosol	75.57	75.57
CDY03344	Canola	cytosol	75.57	75.57
Bra031097.1-P	Field mustard	cytosol	75.57	75.57
Bra039018.1-P	Field mustard	cytosol	75.57	75.57
CDX82720	Canola	cytosol	75.57	75.57
CDX81944	Canola	cytosol	75.57	75.57
AT2G19760.1	Thale cress	cytosol	74.81	74.81
HORVU3Hr1G019670.1	Barley	cytosol	74.81	74.81
CDX88579	Canola	cytosol	74.81	74.24
CDY06819	Canola	cytosol	74.05	74.05
CDY68825	Canola	cytosol	74.05	74.05
Bra011099.1-P	Field mustard	cytosol	74.05	74.05
Bra006865.1-P	Field mustard	cytosol	75.57	73.88
AT5G56600.1	Thale cress	cytosol	73.28	73.28
AT4G29350.1	Thale cress	cytosol	72.52	72.52
HORVU7Hr1G040070.1	Barley	cytosol	23.66	70.45
HORVU3Hr1G070490.1	Barley	mitochondrion	89.31	70.06
HORVU7Hr1G022570.1	Barley	cytosol, plastid	80.15	58.33
CDY03443	Canola	cytosol	29.01	56.72
CDX99366	Canola	cytosol, mitochondrion, vacuole	40.46	42.74
CDY40192	Canola	cytosol, plastid	24.43	41.03
HORVU3Hr1G070510.2	Barley	cytosol	40.46	39.85
HORVU2Hr1G073450.7	Barley	extracellular	33.59	33.85
Bra014545.1-P	Field mustard	cytosol	46.56	29.76
HORVU2Hr1G048590.3	Barley	plastid	30.53	26.49
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	25.95	23.61
CDY13363	Canola	peroxisome, plasma membrane, plastid	47.33	17.97

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EMBL:AK376557	UniProt:F2EK80	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
EnsemblPlantsGene:HORVU1Hr1G075570	EnsemblPlants:HORVU1Hr1G075570.2	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI0002009164	SEG:seg	:	:	:

Description

Profilin [Source:UniProtKB/TrEMBL;Acc:F2EK80]

Coordinates

chrchr1H:-:511401650..511403025

Molecular Weight (calculated)

14135.0 Da

IEP (calculated)

4.494

GRAVY (calculated)

-0.052

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDIEGHHL ASAAILGHDG TVWAQSADFP QFGPNEITGI MKDFDEPGYL APTGMFIATA KYMVIQGEPG AVIRGKKGAG GITIKKTGQA
101: LVVGIYDEPM TPGQCNMVVE RLGDYLVEQG M

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.