Factsheet for Zm00001d038783_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78328	Sorghum	cytosol	59.54	91.76
EES19838	Sorghum	cytosol	90.08	90.08
Zm00001d012772_P001	Maize	cytosol	88.55	88.55
Zm00001d012773_P003	Maize	cytosol	87.79	87.12
Zm00001d010797_P001	Maize	cytosol	90.08	86.13
Zm00001d043523_P001	Maize	cytosol	86.26	85.61
HORVU1Hr1G075600.2	Barley	cytosol	28.24	82.22
TraesCS1B01G356700.1	Wheat	cytosol	79.39	79.39
HORVU1Hr1G075570.2	Barley	cytosol	78.63	78.63
AT4G29350.1	Thale cress	cytosol	74.05	74.05
CDY21648	Canola	cytosol	74.05	74.05
Bra031097.1-P	Field mustard	cytosol	74.05	74.05
CDX81944	Canola	cytosol	74.05	74.05
CDY03344	Canola	cytosol	73.28	73.28
Bra036707.1-P	Field mustard	cytosol	73.28	73.28
CDY48724	Canola	cytosol	73.28	73.28
Bra011099.1-P	Field mustard	cytosol	72.52	72.52
CDY06819	Canola	cytosol	72.52	72.52
CDY35886	Canola	cytosol	72.52	72.52
CDX82720	Canola	cytosol	72.52	72.52
CDY68825	Canola	cytosol	72.52	72.52
Bra039018.1-P	Field mustard	cytosol	72.52	72.52
TraesCS1A01G343400.1	Wheat	cytosol	79.39	72.22
Bra002804.1-P	Field mustard	cytosol	71.76	71.76
CDY32870	Canola	cytosol	71.76	71.76
CDY64971	Canola	cytosol	70.99	70.99
AT2G19760.1	Thale cress	cytosol	70.99	70.99
AT5G56600.1	Thale cress	cytosol	68.7	68.7
CDY11912	Canola	cytosol	68.7	68.18
CDX88579	Canola	cytosol	67.94	67.42
Bra006865.1-P	Field mustard	cytosol	67.94	66.42
CDY03443	Canola	cytosol	25.95	50.75
Zm00001d036213_P002	Maize	cytosol	58.02	47.2
CDY40192	Canola	cytosol, plastid	25.95	43.59
CDX99366	Canola	cytosol, mitochondrion, vacuole	38.93	41.13
Bra014545.1-P	Field mustard	cytosol	42.75	27.32
CDY13363	Canola	peroxisome, plasma membrane, plastid	41.98	15.94

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EntrezGene:542409	ProteinID:AQK87804.1	EMBL:BT069882	UniProt:C0PNL3
GO:GO:0003674	GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515	GO:GO:0005546
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0006810
GO:GO:0007097	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030845	GO:GO:0032956	GO:GO:0042989	GO:GO:0070064	PFAM:PF00235
InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770	UniParc:UPI000195D3B0	EnsemblPlantsGene:Zm00001d038783
EnsemblPlants:Zm00001d038783_P001	EnsemblPlants:Zm00001d038783_T001	:	:	:	:

Description

profilin homolog1Profilin-1

Coordinates

chr6:+:164327814..164329029

Molecular Weight (calculated)

14122.0 Da

IEP (calculated)

4.704

GRAVY (calculated)

-0.102

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCEIEGHHL TSAAIVGHDG ATWAQSTAFP EFKAEEMAAI MKDFDEPGHL APTGLILGGT KYMVIQGEPG AVIRGKKGSG GITVKKTGQS
101: LIIGIYDEPM TPGQCNLVVE RLGDYLLEQG M

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.