Factsheet for HORVU1Hr1G075600.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular
MultiLoc:	cytosol
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78328	Sorghum	cytosol	88.89	47.06
CDY03443	Canola	cytosol	53.33	35.82
HORVU1Hr1G075570.2	Barley	cytosol	97.78	33.59
TraesCS1B01G356700.1	Wheat	cytosol	93.33	32.06
EES19838	Sorghum	cytosol	88.89	30.53
Zm00001d010797_P001	Maize	cytosol	91.11	29.93
TraesCS1A01G343400.1	Wheat	cytosol	93.33	29.17
Zm00001d038783_P001	Maize	cytosol	82.22	28.24
CDY32870	Canola	cytosol	80.0	27.48
CDY64971	Canola	cytosol	80.0	27.48
Bra002804.1-P	Field mustard	cytosol	80.0	27.48
CDY11912	Canola	cytosol	80.0	27.27
AT4G29350.1	Thale cress	cytosol	77.78	26.72
AT5G56600.1	Thale cress	cytosol	77.78	26.72
CDX88579	Canola	cytosol	77.78	26.52
Bra006865.1-P	Field mustard	cytosol	77.78	26.12
HORVU3Hr1G019670.1	Barley	cytosol	75.56	25.95
CDY68825	Canola	cytosol	73.33	25.19
Bra011099.1-P	Field mustard	cytosol	73.33	25.19
Bra031097.1-P	Field mustard	cytosol	73.33	25.19
CDX81944	Canola	cytosol	73.33	25.19
Bra036707.1-P	Field mustard	cytosol	73.33	25.19
CDY48724	Canola	cytosol	73.33	25.19
CDY35886	Canola	cytosol	73.33	25.19
CDX82720	Canola	cytosol	73.33	25.19
CDY03344	Canola	cytosol	73.33	25.19
Bra039018.1-P	Field mustard	cytosol	73.33	25.19
CDY06819	Canola	cytosol	73.33	25.19
CDY21648	Canola	cytosol	73.33	25.19
AT2G19760.1	Thale cress	cytosol	73.33	25.19
HORVU3Hr1G070490.1	Barley	mitochondrion	91.11	24.55
HORVU7Hr1G022570.1	Barley	cytosol, plastid	84.44	21.11
CDX99366	Canola	cytosol, mitochondrion, vacuole	48.89	17.74
Bra014545.1-P	Field mustard	cytosol	44.44	9.76
CDY13363	Canola	peroxisome, plasma membrane, plastid	53.33	6.96
HORVU3Hr1G070510.2	Barley	cytosol	17.78	6.02
HORVU2Hr1G073450.7	Barley	extracellular	13.33	4.62
CDY40192	Canola	cytosol, plastid	4.44	2.56
HORVU2Hr1G048590.3	Barley	plastid	0.0	0.0
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	0.0	0.0
HORVU7Hr1G040070.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G075600.2	EnsemblPlantsGene:HORVU1Hr1G075600	Gene3D:3.30.450.30	InterPro:PFN	InterPro:PFN_sf	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	PFAM:PF00235	PRINTS:PR00392	PRINTS:PR01640	SUPFAM:SSF55770	MapMan:20.2.2.3

Description

No Description!

Coordinates

chrchr1H:-:511546853..511547287

Molecular Weight (calculated)

4771.9 Da

IEP (calculated)

4.265

GRAVY (calculated)

0.104

Length

45 amino acids

Sequence
(BLAST)

1: MGAGGITIKK TGQALVVGIY DEPMTPGQCN MVVERLGDYL VEQGM

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.