Factsheet for Bra002804.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64971	Canola	cytosol	99.24	99.24
CDY32870	Canola	cytosol	99.24	99.24
AT5G56600.1	Thale cress	cytosol	88.55	88.55
Bra039018.1-P	Field mustard	cytosol	87.79	87.79
Bra036707.1-P	Field mustard	cytosol	87.79	87.79
Bra006865.1-P	Field mustard	cytosol	89.31	87.31
Bra031097.1-P	Field mustard	cytosol	87.02	87.02
Bra011099.1-P	Field mustard	cytosol	83.97	83.97
HORVU1Hr1G075600.2	Barley	cytosol	27.48	80.0
Bra039019.1-P	Field mustard	cytosol	80.92	79.1
Bra031101.1-P	Field mustard	cytosol	80.15	78.36
Bra024148.1-P	Field mustard	cytosol	80.15	78.36
Bra011098.1-P	Field mustard	cytosol	80.15	78.36
EER87860	Sorghum	cytosol	77.86	77.86
Os10t0323900-01	Rice	cytosol, plasma membrane	77.86	77.86
HORVU1Hr1G075570.2	Barley	cytosol	77.86	77.86
Os10t0323600-01	Rice	cytosol	77.86	77.86
Zm00001d012772_P001	Maize	cytosol	77.1	77.1
TraesCS1B01G356700.1	Wheat	cytosol	77.1	77.1
EES01452	Sorghum	cytosol	77.1	77.1
Os06t0152100-01	Rice	extracellular	77.1	77.1
Bra036705.1-P	Field mustard	cytosol	78.63	76.87
Bra010331.1-P	Field mustard	cytosol	78.63	76.87
Zm00001d043523_P001	Maize	cytosol	77.1	76.52
OQU78328	Sorghum	cytosol	49.62	76.47
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	76.34	76.34
TraesCS3B01G311200.1	Wheat	cytosol	76.34	76.34
Zm00001d012773_P003	Maize	cytosol	75.57	75.0
EES19838	Sorghum	cytosol	74.81	74.81
Zm00001d038783_P001	Maize	cytosol	71.76	71.76
TraesCS7D01G101800.1	Wheat	cytosol	77.86	70.83
TraesCS1A01G343400.1	Wheat	cytosol	77.1	70.14
Zm00001d010797_P001	Maize	cytosol	72.52	69.34
TraesCS3A01G277000.1	Wheat	cytosol	74.81	68.06
HORVU7Hr1G040070.1	Barley	cytosol	22.14	65.91
CDY03443	Canola	cytosol	32.82	64.18
TraesCS3D01G277200.1	Wheat	cytosol	76.34	61.35
HORVU3Hr1G070490.1	Barley	mitochondrion	76.34	59.88
HORVU7Hr1G022570.1	Barley	cytosol, plastid	77.86	56.67
Zm00001d036213_P002	Maize	cytosol	58.02	47.2
HORVU2Hr1G073450.7	Barley	extracellular	35.88	36.15
HORVU3Hr1G070510.2	Barley	cytosol	33.59	33.08
Bra014545.1-P	Field mustard	cytosol	50.38	32.2
HORVU2Hr1G048590.3	Barley	plastid	32.06	27.81
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	25.19	22.92
CDY13363	Canola	peroxisome, plasma membrane, plastid	55.73	21.16

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EnsemblPlantsGene:Bra002804	EnsemblPlants:Bra002804.1	EnsemblPlants:Bra002804.1-P	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	UniProt:M4CF22	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI0002544A2C	:	:	:	:

Description

AT5G56600 (E=2e-065) PFN3, PRF3 | PRF3 (PROFILIN 3); actin binding

Coordinates

chrA10:-:7482670..7483605

Molecular Weight (calculated)

14127.0 Da

IEP (calculated)

4.481

GRAVY (calculated)

-0.160

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCDVEGNRL TAAAILGQDG SVWAQSANFP QLKPEEISGI NKDFNEPGTL APTGLFIGGT KYMVIQGEPN AVIRGKKGAG GVTIKKTTQA
101: MVFGIYEEPM TPGQCNMVVE RLGDYLIESG L

Best Arabidopsis Sequence Match ( AT5G56600.1 )
(BLAST)

001: MSWQTYVDDH LMCDVAGNRL TAAAILGQDG SVWAQSNNFP QVKPEEIQGI KDDFTTPGTL APTGLFLGGN KYMVIQGEPN AVIRGKKGAG GVTIKKTTLA
101: LVFGIYDEPM TPGQCNMVVE NLGEYLIESG L

Arabidopsis Description

PRO5Profilin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE63]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.