CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0323900-01	Rice	cytosol, plasma membrane	97.71	97.71
Os10t0323600-01	Rice	cytosol	97.71	97.71
Zm00001d012772_P001	Maize	cytosol	96.18	96.18
Zm00001d012773_P003	Maize	cytosol	96.18	95.45
OQU78328	Sorghum	cytosol	61.83	95.29
Zm00001d043523_P001	Maize	cytosol	95.42	94.7
EES19838	Sorghum	cytosol	92.37	92.37
TraesCS3B01G311200.1	Wheat	cytosol	88.55	88.55
EER87860	Sorghum	cytosol	82.44	82.44
TraesCS3A01G277000.1	Wheat	cytosol	86.26	78.47
CDY21648	Canola	cytosol	77.86	77.86
Bra031097.1-P	Field mustard	cytosol	77.86	77.86
CDX81944	Canola	cytosol	77.86	77.86
Bra002804.1-P	Field mustard	cytosol	77.1	77.1
CDY03344	Canola	cytosol	77.1	77.1
Bra036707.1-P	Field mustard	cytosol	77.1	77.1
Bra039018.1-P	Field mustard	cytosol	77.1	77.1
CDY32870	Canola	cytosol	77.1	77.1
CDY35886	Canola	cytosol	77.1	77.1
CDX82720	Canola	cytosol	77.1	77.1
CDY48724	Canola	cytosol	77.1	77.1
AT4G29350.1	Thale cress	cytosol	76.34	76.34
CDY64971	Canola	cytosol	76.34	76.34
CDY68825	Canola	cytosol	75.57	75.57
Bra011099.1-P	Field mustard	cytosol	75.57	75.57
AT2G19760.1	Thale cress	cytosol	75.57	75.57
CDY06819	Canola	cytosol	75.57	75.57
CDY11912	Canola	cytosol	74.81	74.24
AT5G56600.1	Thale cress	cytosol	74.05	74.05
CDX88579	Canola	cytosol	73.28	72.73
Bra006865.1-P	Field mustard	cytosol	74.05	72.39
HORVU3Hr1G070490.1	Barley	mitochondrion	90.84	71.26
TraesCS3D01G277200.1	Wheat	cytosol	88.55	71.17
CDY03443	Canola	cytosol	28.24	55.22
CDY40192	Canola	cytosol, plastid	25.95	43.59
CDX99366	Canola	cytosol, mitochondrion, vacuole	41.22	43.55
KXG31648	Sorghum	plastid	51.15	36.22
Bra014545.1-P	Field mustard	cytosol	45.8	29.27
CDY13363	Canola	peroxisome, plasma membrane, plastid	45.8	17.39

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EntrezGene:8062164	UniProt:C5XJ77	EnsemblPlants:EES01452	ProteinID:EES01452
ProteinID:EES01452.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005938
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0042989	EMBL:KC427125
PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414
PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	EnsemblPlantsGene:SORBI_3003G290500	SUPFAM:SSF55770
unigene:Sbi.11094	UniParc:UPI0001A8492E	RefSeq:XP_002456332.1	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:62306900..62308704

Molecular Weight (calculated)

14302.3 Da

IEP (calculated)

4.672

GRAVY (calculated)

-0.122

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCEIEGHHL TSAAIIGHDG TVWAQSTAFP QFKPEEMTNI MKDFDEPGFL APTGLFLGPT KYMVIQGEPG AVIRGKKGSG GITVKKTGQA
101: LVIGIYDEPM TPGQCNMVVE RLGDYLVEQG L

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.