Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G311200.1 | Wheat | cytosol | 79.75 | 99.24 |
| TraesCS3A01G277000.1 | Wheat | cytosol | 84.05 | 95.14 |
| Os10t0323900-01 | Rice | cytosol, plasma membrane | 72.39 | 90.08 |
| Os10t0323600-01 | Rice | cytosol | 72.39 | 90.08 |
| EES01452 | Sorghum | cytosol | 71.17 | 88.55 |
| Zm00001d043523_P001 | Maize | cytosol | 70.55 | 87.12 |
| Zm00001d012772_P001 | Maize | cytosol | 69.94 | 87.02 |
| Zm00001d012773_P003 | Maize | cytosol | 69.33 | 85.61 |
| CDY35886 | Canola | cytosol | 61.96 | 77.1 |
| Bra039018.1-P | Field mustard | cytosol | 61.35 | 76.34 |
| CDX81944 | Canola | cytosol | 61.35 | 76.34 |
| CDX82720 | Canola | cytosol | 61.35 | 76.34 |
| Bra036707.1-P | Field mustard | cytosol | 61.35 | 76.34 |
| Bra031097.1-P | Field mustard | cytosol | 61.35 | 76.34 |
| CDY03344 | Canola | cytosol | 61.35 | 76.34 |
| CDY48724 | Canola | cytosol | 61.35 | 76.34 |
| Bra002804.1-P | Field mustard | cytosol | 61.35 | 76.34 |
| CDY21648 | Canola | cytosol | 61.35 | 76.34 |
| CDY32870 | Canola | cytosol | 61.35 | 76.34 |
| HORVU3Hr1G070490.1 | Barley | mitochondrion | 77.91 | 76.05 |
| CDY64971 | Canola | cytosol | 60.74 | 75.57 |
| TraesCS3D01G110000.1 | Wheat | cytosol | 60.12 | 74.81 |
| AT2G19760.1 | Thale cress | cytosol | 60.12 | 74.81 |
| TraesCS7D01G101800.1 | Wheat | cytosol | 65.64 | 74.31 |
| CDY06819 | Canola | cytosol | 59.51 | 74.05 |
| CDY68825 | Canola | cytosol | 59.51 | 74.05 |
| Bra011099.1-P | Field mustard | cytosol | 59.51 | 74.05 |
| CDY11912 | Canola | cytosol | 59.51 | 73.48 |
| AT5G56600.1 | Thale cress | cytosol | 58.9 | 73.28 |
| AT4G29350.1 | Thale cress | cytosol | 58.28 | 72.52 |
| CDX88579 | Canola | cytosol | 58.28 | 71.97 |
| Bra006865.1-P | Field mustard | cytosol | 58.9 | 71.64 |
| CDY03443 | Canola | cytosol | 22.7 | 55.22 |
| CDY40192 | Canola | cytosol, plastid | 21.47 | 44.87 |
| CDX99366 | Canola | cytosol, mitochondrion, vacuole | 31.29 | 41.13 |
| Bra014545.1-P | Field mustard | cytosol | 34.97 | 27.8 |
| CDY13363 | Canola | peroxisome, plasma membrane, plastid | 38.65 | 18.26 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G277200.1 | EnsemblPlantsGene:TraesCS3D01G277200 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:PFN | InterPro:PFN_sf | InterPro:Profilin_CS | PANTHER:PTHR11604 | PANTHER:PTHR11604:SF7 | PFAM:PF00235 |
| PRINTS:PR00392 | PRINTS:PR01640 | ScanProsite:PS00414 | SEG:seg | SMART:SM00392 | SUPFAM:SSF55770 |
| TIGR:cd00148 | MapMan:20.2.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:384566934..384567901
Molecular Weight (calculated)
17890.7 Da
IEP (calculated)
4.653
GRAVY (calculated)
-0.054
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQTYVDEH LMCDIEGHHL ASAAILGHDG TVWAQSADFP SVRKPRMANP LVAIWRLHEP CFDDLDMFAC VIQFKPEEMT NIMKDFDEPG TLAPTGLLLG
101: DAKYMVIQGE PGAVIRGKKG AGGITLKKTG QALVVGIYDE PMTPGQCNLV VERLGDYLVE QGM
101: DAKYMVIQGE PGAVIRGKKG AGGITLKKTG QALVVGIYDE PMTPGQCNLV VERLGDYLVE QGM
001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
Arabidopsis Description
PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.