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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU78328 Sorghum cytosol 37.18 34.12
CDY48726 Canola cytosol 43.59 29.57
CDY68825 Canola cytosol 48.72 29.01
CDY06819 Canola cytosol 47.44 28.24
CDX81944 Canola cytosol 43.59 25.95
Zm00001d038783_P001 Maize cytosol 43.59 25.95
TraesCS7A01G107400.1 Wheat cytosol, golgi, plastid 43.59 25.95
TraesCS3B01G311200.1 Wheat cytosol 43.59 25.95
Os10t0323900-01 Rice cytosol, plasma membrane 43.59 25.95
Os10t0323600-01 Rice cytosol 43.59 25.95
EES19838 Sorghum cytosol 43.59 25.95
EES01452 Sorghum cytosol 43.59 25.95
CDY48724 Canola cytosol 43.59 25.95
CDY35886 Canola cytosol 43.59 25.95
CDY21648 Canola cytosol 43.59 25.95
CDX82720 Canola cytosol 43.59 25.95
CDY03344 Canola cytosol 43.59 25.95
Zm00001d043523_P001 Maize cytosol 43.59 25.76
Zm00001d012772_P001 Maize cytosol 42.31 25.19
TraesCS1B01G356700.1 Wheat cytosol 42.31 25.19
EER87860 Sorghum cytosol 42.31 25.19
CDY03342 Canola cytosol 42.31 24.63
CDY32870 Canola cytosol 41.03 24.43
AT5G56600.1 Thale cress cytosol 41.03 24.43
Os06t0152100-01 Rice extracellular 41.03 24.43
HORVU1Hr1G075570.2 Barley cytosol 41.03 24.43
Zm00001d012773_P003 Maize cytosol 41.03 24.24
Zm00001d010797_P001 Maize cytosol 42.31 24.09
CDY30218 Canola cytosol 41.03 23.88
CDX81945 Canola cytosol 41.03 23.88
CDY14215 Canola cytosol 41.03 23.88
CDY35887 Canola cytosol 41.03 23.88
CDY47769 Canola cytosol 41.03 23.88
CDY48612 Canola cytosol 41.03 23.88
CDY06821 Canola cytosol 41.03 23.88
CDY62034 Canola cytosol 41.03 23.88
CDY64971 Canola cytosol 39.74 23.66
TraesCS7D01G101800.1 Wheat cytosol 43.59 23.61
HORVU2Hr1G073450.7 Barley extracellular 38.46 23.08
TraesCS1A01G343400.1 Wheat cytosol 42.31 22.92
TraesCS3A01G277000.1 Wheat cytosol 42.31 22.92
CDX88579 Canola cytosol 38.46 22.73
CDY11912 Canola cytosol 38.46 22.73
Zm00001d036213_P002 Maize cytosol 44.87 21.74
TraesCS3D01G277200.1 Wheat cytosol 44.87 21.47
HORVU3Hr1G070490.1 Barley mitochondrion 43.59 20.36
CDX99366 Canola cytosol, mitochondrion, vacuole 32.05 20.16
CDY03443 Canola cytosol 16.67 19.4
HORVU7Hr1G022570.1 Barley cytosol, plastid 43.59 18.89
HORVU2Hr1G048590.3 Barley plastid 34.62 17.88
HORVU7Hr1G040070.1 Barley cytosol 7.69 13.64
HORVU3Hr1G070510.2 Barley cytosol 15.38 9.02
CDX82721 Canola cytosol 15.38 8.63
HORVU5Hr1G053460.1 Barley cytosol, nucleus, plastid 15.38 8.33
CDY13363 Canola peroxisome, plasma membrane, plastid 28.21 6.38
HORVU1Hr1G075600.2 Barley cytosol 2.56 4.44
Protein Annotations
EnsemblPlants:CDY40192EnsemblPlantsGene:GSBRNA2T00069331001Gene3D:3.30.450.30InterPro:PFNInterPro:PFN_sfPANTHER:PTHR11604
PANTHER:PTHR11604:SF7PFAM:PF00235PRINTS:PR01640ProteinID:CDY40192ProteinID:CDY40192.1SUPFAM:SSF55770
UniParc:UPI0004EE8246UniProt:A0A078HQS4MapMan:20.2.2.3:::
Description
BnaC04g14200DBnaC04g14200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQS4]
Coordinates
chrLK032465:+:274987..276045
Molecular Weight (calculated)
8558.5 Da
IEP (calculated)
10.704
GRAVY (calculated)
-0.405
Length
78 amino acids
Sequence
(BLAST)
1: MNRILSSSLL IDNTLESKFK QRGPLWESRK TEEPGNLAPT GLFLGGEKYM VVQGEAGAVI RGKKAQIGSI RILRGEKS
Best Arabidopsis Sequence Match ( AT4G29350.1 )
(BLAST)
001: MSWQSYVDDH LMCEVEGNHL THAAIFGQDG SVWAQSSAFP QLKPAEIAGI NKDFEEAGHL APTGLFLGGE KYMVVQGEAG AVIRGKKGPG GVTIKKTTQA
101: LVFGIYDEPM TGGQCNLVVE RLGDYLIESG L
Arabidopsis Description
PRO2Profilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q42418]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.