Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU78328 | Sorghum | cytosol | 37.18 | 34.12 |
CDY48726 | Canola | cytosol | 43.59 | 29.57 |
CDY68825 | Canola | cytosol | 48.72 | 29.01 |
CDY06819 | Canola | cytosol | 47.44 | 28.24 |
CDX81944 | Canola | cytosol | 43.59 | 25.95 |
Zm00001d038783_P001 | Maize | cytosol | 43.59 | 25.95 |
TraesCS7A01G107400.1 | Wheat | cytosol, golgi, plastid | 43.59 | 25.95 |
TraesCS3B01G311200.1 | Wheat | cytosol | 43.59 | 25.95 |
Os10t0323900-01 | Rice | cytosol, plasma membrane | 43.59 | 25.95 |
Os10t0323600-01 | Rice | cytosol | 43.59 | 25.95 |
EES19838 | Sorghum | cytosol | 43.59 | 25.95 |
EES01452 | Sorghum | cytosol | 43.59 | 25.95 |
CDY48724 | Canola | cytosol | 43.59 | 25.95 |
CDY35886 | Canola | cytosol | 43.59 | 25.95 |
CDY21648 | Canola | cytosol | 43.59 | 25.95 |
CDX82720 | Canola | cytosol | 43.59 | 25.95 |
CDY03344 | Canola | cytosol | 43.59 | 25.95 |
Zm00001d043523_P001 | Maize | cytosol | 43.59 | 25.76 |
Zm00001d012772_P001 | Maize | cytosol | 42.31 | 25.19 |
TraesCS1B01G356700.1 | Wheat | cytosol | 42.31 | 25.19 |
EER87860 | Sorghum | cytosol | 42.31 | 25.19 |
CDY03342 | Canola | cytosol | 42.31 | 24.63 |
CDY32870 | Canola | cytosol | 41.03 | 24.43 |
AT5G56600.1 | Thale cress | cytosol | 41.03 | 24.43 |
Os06t0152100-01 | Rice | extracellular | 41.03 | 24.43 |
HORVU1Hr1G075570.2 | Barley | cytosol | 41.03 | 24.43 |
Zm00001d012773_P003 | Maize | cytosol | 41.03 | 24.24 |
Zm00001d010797_P001 | Maize | cytosol | 42.31 | 24.09 |
CDY30218 | Canola | cytosol | 41.03 | 23.88 |
CDX81945 | Canola | cytosol | 41.03 | 23.88 |
CDY14215 | Canola | cytosol | 41.03 | 23.88 |
CDY35887 | Canola | cytosol | 41.03 | 23.88 |
CDY47769 | Canola | cytosol | 41.03 | 23.88 |
CDY48612 | Canola | cytosol | 41.03 | 23.88 |
CDY06821 | Canola | cytosol | 41.03 | 23.88 |
CDY62034 | Canola | cytosol | 41.03 | 23.88 |
CDY64971 | Canola | cytosol | 39.74 | 23.66 |
TraesCS7D01G101800.1 | Wheat | cytosol | 43.59 | 23.61 |
HORVU2Hr1G073450.7 | Barley | extracellular | 38.46 | 23.08 |
TraesCS1A01G343400.1 | Wheat | cytosol | 42.31 | 22.92 |
TraesCS3A01G277000.1 | Wheat | cytosol | 42.31 | 22.92 |
CDX88579 | Canola | cytosol | 38.46 | 22.73 |
CDY11912 | Canola | cytosol | 38.46 | 22.73 |
Zm00001d036213_P002 | Maize | cytosol | 44.87 | 21.74 |
TraesCS3D01G277200.1 | Wheat | cytosol | 44.87 | 21.47 |
HORVU3Hr1G070490.1 | Barley | mitochondrion | 43.59 | 20.36 |
CDX99366 | Canola | cytosol, mitochondrion, vacuole | 32.05 | 20.16 |
CDY03443 | Canola | cytosol | 16.67 | 19.4 |
HORVU7Hr1G022570.1 | Barley | cytosol, plastid | 43.59 | 18.89 |
HORVU2Hr1G048590.3 | Barley | plastid | 34.62 | 17.88 |
HORVU7Hr1G040070.1 | Barley | cytosol | 7.69 | 13.64 |
HORVU3Hr1G070510.2 | Barley | cytosol | 15.38 | 9.02 |
CDX82721 | Canola | cytosol | 15.38 | 8.63 |
HORVU5Hr1G053460.1 | Barley | cytosol, nucleus, plastid | 15.38 | 8.33 |
CDY13363 | Canola | peroxisome, plasma membrane, plastid | 28.21 | 6.38 |
HORVU1Hr1G075600.2 | Barley | cytosol | 2.56 | 4.44 |
Protein Annotations
EnsemblPlants:CDY40192 | EnsemblPlantsGene:GSBRNA2T00069331001 | Gene3D:3.30.450.30 | InterPro:PFN | InterPro:PFN_sf | PANTHER:PTHR11604 |
PANTHER:PTHR11604:SF7 | PFAM:PF00235 | PRINTS:PR01640 | ProteinID:CDY40192 | ProteinID:CDY40192.1 | SUPFAM:SSF55770 |
UniParc:UPI0004EE8246 | UniProt:A0A078HQS4 | MapMan:20.2.2.3 | : | : | : |
Description
BnaC04g14200DBnaC04g14200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQS4]
Coordinates
chrLK032465:+:274987..276045
Molecular Weight (calculated)
8558.5 Da
IEP (calculated)
10.704
GRAVY (calculated)
-0.405
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MNRILSSSLL IDNTLESKFK QRGPLWESRK TEEPGNLAPT GLFLGGEKYM VVQGEAGAVI RGKKAQIGSI RILRGEKS
001: MSWQSYVDDH LMCEVEGNHL THAAIFGQDG SVWAQSSAFP QLKPAEIAGI NKDFEEAGHL APTGLFLGGE KYMVVQGEAG AVIRGKKGPG GVTIKKTTQA
101: LVFGIYDEPM TGGQCNLVVE RLGDYLIESG L
101: LVFGIYDEPM TGGQCNLVVE RLGDYLIESG L
Arabidopsis Description
PRO2Profilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q42418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.