Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
extracellular:
24083427
extracellular: 25047395 extracellular: 26072143 plasma membrane: 27800704 plastid: 27992503 plasma membrane: 28056797 extracellular: 28232208 |
msms PMID:
26072143
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID:
24083427
doi
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7A01G107400.1 | Wheat | cytosol, golgi, plastid | 84.73 | 84.73 |
Os10t0323900-01 | Rice | cytosol, plasma membrane | 82.44 | 82.44 |
Os10t0323600-01 | Rice | cytosol | 82.44 | 82.44 |
EER87860 | Sorghum | cytosol | 81.68 | 81.68 |
TraesCS7D01G101800.1 | Wheat | cytosol | 86.26 | 78.47 |
CDY64971 | Canola | cytosol | 77.1 | 77.1 |
Bra002804.1-P | Field mustard | cytosol | 77.1 | 77.1 |
CDY32870 | Canola | cytosol | 77.1 | 77.1 |
CDY48724 | Canola | cytosol | 76.34 | 76.34 |
Bra036707.1-P | Field mustard | cytosol | 76.34 | 76.34 |
Bra039018.1-P | Field mustard | cytosol | 76.34 | 76.34 |
CDX82720 | Canola | cytosol | 76.34 | 76.34 |
CDY03344 | Canola | cytosol | 76.34 | 76.34 |
AT5G56600.1 | Thale cress | cytosol | 76.34 | 76.34 |
Bra031097.1-P | Field mustard | cytosol | 75.57 | 75.57 |
CDX81944 | Canola | cytosol | 75.57 | 75.57 |
CDY35886 | Canola | cytosol | 75.57 | 75.57 |
CDY21648 | Canola | cytosol | 75.57 | 75.57 |
AT4G29350.1 | Thale cress | cytosol | 74.81 | 74.81 |
AT2G19760.1 | Thale cress | cytosol | 74.81 | 74.81 |
CDY11912 | Canola | cytosol | 74.81 | 74.24 |
CDY06819 | Canola | cytosol | 74.05 | 74.05 |
Bra011099.1-P | Field mustard | cytosol | 74.05 | 74.05 |
CDY68825 | Canola | cytosol | 74.05 | 74.05 |
CDX88579 | Canola | cytosol | 73.28 | 72.73 |
Bra006865.1-P | Field mustard | cytosol | 72.52 | 70.9 |
HORVU7Hr1G022570.1 | Barley | cytosol, plastid | 87.02 | 63.33 |
Os01t0191150-00 | Rice | endoplasmic reticulum, extracellular | 24.43 | 55.17 |
Zm00001d036213_P002 | Maize | cytosol | 61.83 | 50.31 |
CDY03443 | Canola | cytosol | 23.66 | 46.27 |
CDX99366 | Canola | cytosol, mitochondrion, vacuole | 43.51 | 45.97 |
CDY40192 | Canola | cytosol, plastid | 24.43 | 41.03 |
HORVU2Hr1G073450.7 | Barley | extracellular | 38.17 | 38.46 |
HORVU2Hr1G048590.3 | Barley | plastid | 35.11 | 30.46 |
Bra014545.1-P | Field mustard | cytosol | 46.56 | 29.76 |
CDY13363 | Canola | peroxisome, plasma membrane, plastid | 41.98 | 15.94 |
Protein Annotations
MapMan:20.2.2.3 | Gene3D:3.30.450.30 | EntrezGene:4340155 | EMBL:AK058798 | EMBL:AK121519 | ProteinID:BAD69068.1 |
ProteinID:BAD69332.1 | ProteinID:BAF18747.1 | ProteinID:BAS96199.1 | ProteinID:EAZ35855.1 | GO:GO:0003674 | GO:GO:0003779 |
GO:GO:0003785 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005938 | GO:GO:0008150 | GO:GO:0009536 | GO:GO:0009987 |
GO:GO:0015629 | GO:GO:0016043 | GO:GO:0042989 | EnsemblPlantsGene:Os06g0152100 | EnsemblPlants:Os06t0152100-01 | PFAM:PF00235 |
InterPro:PFN | InterPro:PFN_sf | PRINTS:PR00392 | PRINTS:PR01640 | ScanProsite:PS00414 | PANTHER:PTHR11604 |
PANTHER:PTHR11604:SF7 | InterPro:Profilin_CS | UniProt:Q5VMJ3 | SMART:SM00392 | SUPFAM:SSF55770 | UniParc:UPI0000458046 |
RefSeq:XP_015642483.1 | : | : | : | : | : |
Description
Similar to Profilin-2. (Os06t0152100-01)
Coordinates
chr6:+:2690219..2693031
Molecular Weight (calculated)
14134.1 Da
IEP (calculated)
4.495
GRAVY (calculated)
-0.071
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQAYVDDH LMCEIDGNHL TAAAIVGHDG SVWAQSPNFP QYKPEEITGI MKDFDEPGSL APTGLFLGGT KYMVIQGEPG VVIRGKKGTG GICVKKTGLS
101: LILGIYDEPM TPGQCNMIVE RLGDYLIEQG C
101: LILGIYDEPM TPGQCNMIVE RLGDYLIEQG C
001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL
Arabidopsis Description
PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.