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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • cytosol 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
extracellular: 24083427
extracellular: 25047395
extracellular: 26072143
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797
extracellular: 28232208
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G107400.1 Wheat cytosol, golgi, plastid 84.73 84.73
Os10t0323900-01 Rice cytosol, plasma membrane 82.44 82.44
Os10t0323600-01 Rice cytosol 82.44 82.44
EER87860 Sorghum cytosol 81.68 81.68
TraesCS7D01G101800.1 Wheat cytosol 86.26 78.47
CDY64971 Canola cytosol 77.1 77.1
Bra002804.1-P Field mustard cytosol 77.1 77.1
CDY32870 Canola cytosol 77.1 77.1
CDY48724 Canola cytosol 76.34 76.34
Bra036707.1-P Field mustard cytosol 76.34 76.34
Bra039018.1-P Field mustard cytosol 76.34 76.34
CDX82720 Canola cytosol 76.34 76.34
CDY03344 Canola cytosol 76.34 76.34
AT5G56600.1 Thale cress cytosol 76.34 76.34
Bra031097.1-P Field mustard cytosol 75.57 75.57
CDX81944 Canola cytosol 75.57 75.57
CDY35886 Canola cytosol 75.57 75.57
CDY21648 Canola cytosol 75.57 75.57
AT4G29350.1 Thale cress cytosol 74.81 74.81
AT2G19760.1 Thale cress cytosol 74.81 74.81
CDY11912 Canola cytosol 74.81 74.24
CDY06819 Canola cytosol 74.05 74.05
Bra011099.1-P Field mustard cytosol 74.05 74.05
CDY68825 Canola cytosol 74.05 74.05
CDX88579 Canola cytosol 73.28 72.73
Bra006865.1-P Field mustard cytosol 72.52 70.9
HORVU7Hr1G022570.1 Barley cytosol, plastid 87.02 63.33
Os01t0191150-00 Rice endoplasmic reticulum, extracellular 24.43 55.17
Zm00001d036213_P002 Maize cytosol 61.83 50.31
CDY03443 Canola cytosol 23.66 46.27
CDX99366 Canola cytosol, mitochondrion, vacuole 43.51 45.97
CDY40192 Canola cytosol, plastid 24.43 41.03
HORVU2Hr1G073450.7 Barley extracellular 38.17 38.46
HORVU2Hr1G048590.3 Barley plastid 35.11 30.46
Bra014545.1-P Field mustard cytosol 46.56 29.76
CDY13363 Canola peroxisome, plasma membrane, plastid 41.98 15.94
Protein Annotations
MapMan:20.2.2.3Gene3D:3.30.450.30EntrezGene:4340155EMBL:AK058798EMBL:AK121519ProteinID:BAD69068.1
ProteinID:BAD69332.1ProteinID:BAF18747.1ProteinID:BAS96199.1ProteinID:EAZ35855.1GO:GO:0003674GO:GO:0003779
GO:GO:0003785GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005856GO:GO:0005938GO:GO:0008150GO:GO:0009536GO:GO:0009987
GO:GO:0015629GO:GO:0016043GO:GO:0042989EnsemblPlantsGene:Os06g0152100EnsemblPlants:Os06t0152100-01PFAM:PF00235
InterPro:PFNInterPro:PFN_sfPRINTS:PR00392PRINTS:PR01640ScanProsite:PS00414PANTHER:PTHR11604
PANTHER:PTHR11604:SF7InterPro:Profilin_CSUniProt:Q5VMJ3SMART:SM00392SUPFAM:SSF55770UniParc:UPI0000458046
RefSeq:XP_015642483.1:::::
Description
Similar to Profilin-2. (Os06t0152100-01)
Coordinates
chr6:+:2690219..2693031
Molecular Weight (calculated)
14134.1 Da
IEP (calculated)
4.495
GRAVY (calculated)
-0.071
Length
131 amino acids
Sequence
(BLAST)
001: MSWQAYVDDH LMCEIDGNHL TAAAIVGHDG SVWAQSPNFP QYKPEEITGI MKDFDEPGSL APTGLFLGGT KYMVIQGEPG VVIRGKKGTG GICVKKTGLS
101: LILGIYDEPM TPGQCNMIVE RLGDYLIEQG C
Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)
001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL
Arabidopsis Description
PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.