CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78328	Sorghum	cytosol	56.49	87.06
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	84.73	84.73
EES01452	Sorghum	cytosol	82.44	82.44
Os06t0152100-01	Rice	extracellular	81.68	81.68
EES19838	Sorghum	cytosol	80.92	80.92
TraesCS7D01G101800.1	Wheat	cytosol	86.26	78.47
Bra002804.1-P	Field mustard	cytosol	77.86	77.86
CDY32870	Canola	cytosol	77.86	77.86
CDY64971	Canola	cytosol	77.1	77.1
CDY03344	Canola	cytosol	76.34	76.34
CDY48724	Canola	cytosol	76.34	76.34
CDY35886	Canola	cytosol	76.34	76.34
CDY21648	Canola	cytosol	76.34	76.34
CDX82720	Canola	cytosol	76.34	76.34
CDX81944	Canola	cytosol	76.34	76.34
Bra039018.1-P	Field mustard	cytosol	76.34	76.34
Bra036707.1-P	Field mustard	cytosol	76.34	76.34
Bra031097.1-P	Field mustard	cytosol	76.34	76.34
CDY11912	Canola	cytosol	76.34	75.76
AT4G29350.1	Thale cress	cytosol	75.57	75.57
CDX88579	Canola	cytosol	75.57	75.0
AT5G56600.1	Thale cress	cytosol	74.81	74.81
AT2G19760.1	Thale cress	cytosol	74.05	74.05
Bra006865.1-P	Field mustard	cytosol	75.57	73.88
CDY06819	Canola	cytosol	73.28	73.28
Bra011099.1-P	Field mustard	cytosol	73.28	73.28
CDY68825	Canola	cytosol	73.28	73.28
HORVU7Hr1G022570.1	Barley	cytosol, plastid	87.02	63.33
CDY03443	Canola	cytosol	26.72	52.24
Zm00001d036213_P002	Maize	cytosol	63.36	51.55
CDX99366	Canola	cytosol, mitochondrion, vacuole	41.98	44.35
CDY40192	Canola	cytosol, plastid	25.19	42.31
KXG31648	Sorghum	plastid	51.15	36.22
HORVU2Hr1G073450.7	Barley	extracellular	35.88	36.15
Bra014545.1-P	Field mustard	cytosol	46.56	29.76
HORVU2Hr1G048590.3	Barley	plastid	32.82	28.48
CDY13363	Canola	peroxisome, plasma membrane, plastid	43.51	16.52

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EntrezGene:8071328	UniProt:C5Z4B6	EnsemblPlants:EER87860	ProteinID:EER87860
ProteinID:EER87860.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005938
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0042989	PFAM:PF00235
InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	EnsemblPlantsGene:SORBI_3010G041600	SUPFAM:SSF55770	unigene:Sbi.3476
UniParc:UPI0001A89003	RefSeq:XP_002436493.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:3225558..3227768

Molecular Weight (calculated)

14041.0 Da

IEP (calculated)

4.364

GRAVY (calculated)

0.004

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCEIDGQHL SAAAIFGLDG SLWAQSTGFP QLKPEEVAAI TKDFDEPGTL APTGLFVGGT KYMVIQGEPG AVIRGKKGTG GITIKKTGMA
101: LIIGIYDEPM TPGQCNMVVE RLGDYLVEQG F

Best Arabidopsis Sequence Match ( AT4G29350.1 )
(BLAST)

001: MSWQSYVDDH LMCEVEGNHL THAAIFGQDG SVWAQSSAFP QLKPAEIAGI NKDFEEAGHL APTGLFLGGE KYMVVQGEAG AVIRGKKGPG GVTIKKTTQA
101: LVFGIYDEPM TGGQCNLVVE RLGDYLIESG L

Arabidopsis Description

PRO2Profilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q42418]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.