Factsheet for Bra011099.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006216.1-P
Bra008801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29350.1	Bra006216.1-P	AT5G13810.1	21798944
AT4G29350.1	Bra008801.1-P	AT5G13810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68825	Canola	cytosol	99.24	99.24
AT4G29350.1	Thale cress	cytosol	90.84	90.84
Bra039018.1-P	Field mustard	cytosol	89.31	89.31
Bra036707.1-P	Field mustard	cytosol	89.31	89.31
Bra031097.1-P	Field mustard	cytosol	88.55	88.55
Bra002804.1-P	Field mustard	cytosol	83.97	83.97
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	77.1	77.1
EES01452	Sorghum	cytosol	75.57	75.57
Bra039019.1-P	Field mustard	cytosol	77.1	75.37
Bra024148.1-P	Field mustard	cytosol	77.1	75.37
Bra011098.1-P	Field mustard	cytosol	77.1	75.37
Bra006865.1-P	Field mustard	cytosol	77.1	75.37
Zm00001d012772_P001	Maize	cytosol	74.81	74.81
Os10t0323900-01	Rice	cytosol, plasma membrane	74.81	74.81
Os10t0323600-01	Rice	cytosol	74.81	74.81
Bra036705.1-P	Field mustard	cytosol	76.34	74.63
OQU78328	Sorghum	cytosol	48.09	74.12
HORVU1Hr1G075570.2	Barley	cytosol	74.05	74.05
TraesCS3B01G311200.1	Wheat	cytosol	74.05	74.05
TraesCS1B01G356700.1	Wheat	cytosol	74.05	74.05
Os06t0152100-01	Rice	extracellular	74.05	74.05
Bra031101.1-P	Field mustard	cytosol	75.57	73.88
Bra010331.1-P	Field mustard	cytosol	75.57	73.88
Zm00001d043523_P001	Maize	cytosol	74.05	73.48
Zm00001d012773_P003	Maize	cytosol	74.05	73.48
HORVU1Hr1G075600.2	Barley	cytosol	25.19	73.33
EER87860	Sorghum	cytosol	73.28	73.28
Zm00001d038783_P001	Maize	cytosol	72.52	72.52
EES19838	Sorghum	cytosol	72.52	72.52
TraesCS7D01G101800.1	Wheat	cytosol	78.63	71.53
Zm00001d010797_P001	Maize	cytosol	70.99	67.88
TraesCS1A01G343400.1	Wheat	cytosol	74.05	67.36
TraesCS3A01G277000.1	Wheat	cytosol	74.05	67.36
HORVU7Hr1G040070.1	Barley	cytosol	20.61	61.36
TraesCS3D01G277200.1	Wheat	cytosol	74.05	59.51
HORVU3Hr1G070490.1	Barley	mitochondrion	73.28	57.48
HORVU7Hr1G022570.1	Barley	cytosol, plastid	77.86	56.67
Zm00001d036213_P002	Maize	cytosol	55.73	45.34
HORVU2Hr1G073450.7	Barley	extracellular	34.35	34.62
HORVU3Hr1G070510.2	Barley	cytosol	32.82	32.33
Bra014545.1-P	Field mustard	cytosol	45.04	28.78
HORVU2Hr1G048590.3	Barley	plastid	30.53	26.49
HORVU5Hr1G053460.1	Barley	cytosol, nucleus, plastid	26.72	24.31

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EnsemblPlantsGene:Bra011099	EnsemblPlants:Bra011099.1	EnsemblPlants:Bra011099.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005886	GO:GO:0007275	GO:GO:0008150
GO:GO:0008154	GO:GO:0009507	GO:GO:0009536	GO:GO:0009791	GO:GO:0009987	GO:GO:0010229
GO:GO:0016020	GO:GO:0016043	GO:GO:0048366	GO:GO:0048527	UniProt:M4D3P5	PFAM:PF00235
InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770	UniParc:UPI0000E648A2	:

Description

AT2G19760 (E=3e-068) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding

Coordinates

chrA01:-:3879388..3880079

Molecular Weight (calculated)

14146.8 Da

IEP (calculated)

4.443

GRAVY (calculated)

-0.229

Length

131 amino acids

Sequence
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TSAAILGQDG SVWAQSTNFP QLKPAEIEGI KKDFEEPGHL APTGLFLGGE KYMVVQGEGG AVIRGKKGPG GVTIKKTNQA
101: FVFGIYDEPM TGGQCNLVVE RLGDYLIESD L

Best Arabidopsis Sequence Match ( AT2G19760.1 )
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L

Arabidopsis Description

PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.