Factsheet for TraesCS7D01G101800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G107400.1	Wheat	cytosol, golgi, plastid	88.89	97.71
EER87860	Sorghum	cytosol	78.47	86.26
Os06t0152100-01	Rice	extracellular	78.47	86.26
TraesCS3D01G110000.1	Wheat	cytosol	72.22	79.39
CDX82720	Canola	cytosol	71.53	78.63
CDY48724	Canola	cytosol	71.53	78.63
CDY06819	Canola	cytosol	71.53	78.63
CDY68825	Canola	cytosol	71.53	78.63
CDY03344	Canola	cytosol	71.53	78.63
Bra039018.1-P	Field mustard	cytosol	71.53	78.63
Bra036707.1-P	Field mustard	cytosol	71.53	78.63
Bra011099.1-P	Field mustard	cytosol	71.53	78.63
AT4G29350.1	Thale cress	cytosol	71.53	78.63
CDX81944	Canola	cytosol	70.83	77.86
Bra031097.1-P	Field mustard	cytosol	70.83	77.86
Bra002804.1-P	Field mustard	cytosol	70.83	77.86
CDY64971	Canola	cytosol	70.83	77.86
CDY21648	Canola	cytosol	70.83	77.86
CDY32870	Canola	cytosol	70.83	77.86
CDY35886	Canola	cytosol	70.83	77.86
AT2G19760.1	Thale cress	cytosol	70.14	77.1
AT5G56600.1	Thale cress	cytosol	69.44	76.34
CDY11912	Canola	cytosol	68.75	75.0
CDX88579	Canola	cytosol	68.06	74.24
Bra006865.1-P	Field mustard	cytosol	67.36	72.39
TraesCS3D01G277200.1	Wheat	cytosol	74.31	65.64
CDY03443	Canola	cytosol	23.61	50.75
Zm00001d036213_P002	Maize	cytosol	55.56	49.69
CDX99366	Canola	cytosol, mitochondrion, vacuole	39.58	45.97
CDY40192	Canola	cytosol, plastid	23.61	43.59
HORVU2Hr1G073450.7	Barley	extracellular	36.11	40.0
HORVU2Hr1G048590.3	Barley	plastid	35.42	33.77
Bra014545.1-P	Field mustard	cytosol	42.36	29.76
CDY13363	Canola	peroxisome, plasma membrane, plastid	38.89	16.23

Protein Annotations

EnsemblPlants:TraesCS7D01G101800.1	EnsemblPlantsGene:TraesCS7D01G101800	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	InterPro:PFN	InterPro:PFN_sf	InterPro:Profilin_CS	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7
PFAM:PF00235	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	SEG:seg	SMART:SM00392
SUPFAM:SSF55770	TIGR:cd00148	MapMan:20.2.2.3	:	:	:

Description

No Description!

Coordinates

chr7D:+:60700027..60701794

Molecular Weight (calculated)

15711.1 Da

IEP (calculated)

4.660

GRAVY (calculated)

0.065

Length

144 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LCCEIDGQHL TSAAILGHDG SVWAQSPNFP QLYLNFPCSL LLLQFKPEEI AGIIKDFEEP GHLAPTGLFL GGTKYMVIQG EPGVVIRGKK
101: GTGGITIKKT GMALILGIYD EPMTPGQCNL VVERLGDYLV EQGF

Best Arabidopsis Sequence Match ( AT4G29350.1 )
(BLAST)

001: MSWQSYVDDH LMCEVEGNHL THAAIFGQDG SVWAQSSAFP QLKPAEIAGI NKDFEEAGHL APTGLFLGGE KYMVVQGEAG AVIRGKKGPG GVTIKKTTQA
101: LVFGIYDEPM TGGQCNLVVE RLGDYLIESG L

Arabidopsis Description

PRO2Profilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q42418]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.